Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 AL355802.3-201ENST00000607571 545 ntBASIC2.72□□□□□ -1.97
LMX1BO60663 AC093732.2-201ENST00000607950 274 ntBASIC2.72□□□□□ -1.97
LMX1BO60663 AC019193.3-201ENST00000609144 554 ntBASIC2.72□□□□□ -1.97
LMX1BO60663 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.72□□□□□ -1.97
LMX1BO60663 RMST_4.1-201ENST00000616886 107 ntBASIC2.72□□□□□ -1.97
LMX1BO60663 AC010378.1-201ENST00000619270 362 ntBASIC2.72□□□□□ -1.97
LMX1BO60663 AL512643.1-201ENST00000635735 524 ntBASIC2.72□□□□□ -1.97
LMX1BO60663 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.72□□□□□ -1.97
LMX1BO60663 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
LMX1BO60663 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
LMX1BO60663 AC118273.1-201ENST00000525324 3006 ntBASIC2.71□□□□□ -1.97
LMX1BO60663 MTND5P10-201ENST00000603719 1809 ntBASIC2.71□□□□□ -1.98
LMX1BO60663 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
LMX1BO60663 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
LMX1BO60663 Y_RNA.28-201ENST00000362554 111 ntBASIC2.71□□□□□ -1.98
LMX1BO60663 Y_RNA.202-201ENST00000364083 110 ntBASIC2.71□□□□□ -1.98
LMX1BO60663 SNORA7.2-201ENST00000364446 145 ntBASIC2.71□□□□□ -1.98
LMX1BO60663 RNU6-1329P-201ENST00000365664 107 ntBASIC2.71□□□□□ -1.98
LMX1BO60663 SNORD73A-201ENST00000386062 65 ntBASIC2.71□□□□□ -1.98
LMX1BO60663 Y_RNA.594-201ENST00000410373 140 ntBASIC2.71□□□□□ -1.98
LMX1BO60663 RNU6-1050P-201ENST00000410388 107 ntBASIC2.71□□□□□ -1.98
LMX1BO60663 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.71□□□□□ -1.98
LMX1BO60663 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.71□□□□□ -1.98
LMX1BO60663 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.71□□□□□ -1.98
LMX1BO60663 RPL27AP8-201ENST00000424277 446 ntBASIC2.71□□□□□ -1.98
LMX1BO60663 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.71□□□□□ -1.98
LMX1BO60663 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.71□□□□□ -1.98
LMX1BO60663 RNU7-187P-201ENST00000458985 68 ntBASIC2.71□□□□□ -1.98
LMX1BO60663 RNU7-138P-201ENST00000459479 64 ntBASIC2.71□□□□□ -1.98
LMX1BO60663 RN7SL863P-201ENST00000462370 296 ntBASIC2.71□□□□□ -1.98
LMX1BO60663 RPL21P104-201ENST00000464143 478 ntBASIC2.71□□□□□ -1.98
LMX1BO60663 RPL7P42-201ENST00000481005 679 ntBASIC2.71□□□□□ -1.98
LMX1BO60663 RPS4XP13-201ENST00000483219 789 ntBASIC2.71□□□□□ -1.98
LMX1BO60663 AC011005.2-201ENST00000487324 359 ntBASIC2.71□□□□□ -1.98
LMX1BO60663 AC026801.1-201ENST00000497178 464 ntBASIC2.71□□□□□ -1.98
LMX1BO60663 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
LMX1BO60663 AC010265.1-201ENST00000513509 211 ntBASIC2.71□□□□□ -1.98
LMX1BO60663 RNU6-1073P-201ENST00000517182 106 ntBASIC2.71□□□□□ -1.98
LMX1BO60663 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.71□□□□□ -1.98
LMX1BO60663 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
LMX1BO60663 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.71□□□□□ -1.98
LMX1BO60663 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC2.71□□□□□ -1.98
LMX1BO60663 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC2.71□□□□□ -1.98
LMX1BO60663 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.71□□□□□ -1.98
LMX1BO60663 AL157871.3-201ENST00000557231 293 ntBASIC2.71□□□□□ -1.98
LMX1BO60663 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.71□□□□□ -1.98
LMX1BO60663 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
LMX1BO60663 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.71□□□□□ -1.98
LMX1BO60663 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.71□□□□□ -1.98
LMX1BO60663 AC123912.5-201ENST00000605470 343 ntBASIC2.71□□□□□ -1.98
LMX1BO60663 AC009229.3-201ENST00000608056 282 ntBASIC2.71□□□□□ -1.98
LMX1BO60663 AC107294.1-201ENST00000609524 467 ntBASIC2.71□□□□□ -1.98
LMX1BO60663 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.71□□□□□ -1.98
LMX1BO60663 AL137790.1-201ENST00000634283 177 ntBASIC2.71□□□□□ -1.98
LMX1BO60663 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC2.71□□□□□ -1.98
LMX1BO60663 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.71□□□□□ -1.98
LMX1BO60663 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
LMX1BO60663 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
LMX1BO60663 SNORD62.1-201ENST00000362541 86 ntBASIC2.7□□□□□ -1.98
LMX1BO60663 Y_RNA.148-201ENST00000363557 117 ntBASIC2.7□□□□□ -1.98
LMX1BO60663 RNU6-1059P-201ENST00000363752 98 ntBASIC2.7□□□□□ -1.98
LMX1BO60663 Y_RNA.324-201ENST00000365165 102 ntBASIC2.7□□□□□ -1.98
LMX1BO60663 RNU6-890P-201ENST00000384121 107 ntBASIC2.7□□□□□ -1.98
LMX1BO60663 RNU6-842P-201ENST00000384269 107 ntBASIC2.7□□□□□ -1.98
LMX1BO60663 RNU6-306P-201ENST00000384617 107 ntBASIC2.7□□□□□ -1.98
LMX1BO60663 SNORD67-201ENST00000390833 111 ntBASIC2.7□□□□□ -1.98
LMX1BO60663 RNU2-33P-201ENST00000410344 192 ntBASIC2.7□□□□□ -1.98
LMX1BO60663 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.7□□□□□ -1.98
LMX1BO60663 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.7□□□□□ -1.98
LMX1BO60663 USP9YP30-201ENST00000430729 455 ntBASIC2.7□□□□□ -1.98
LMX1BO60663 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.7□□□□□ -1.98
LMX1BO60663 AL645568.3-201ENST00000433683 316 ntBASIC2.7□□□□□ -1.98
LMX1BO60663 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.7□□□□□ -1.98
LMX1BO60663 AC025750.2-201ENST00000442609 450 ntBASIC2.7□□□□□ -1.98
LMX1BO60663 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.7□□□□□ -1.98
LMX1BO60663 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.7□□□□□ -1.98
LMX1BO60663 MIR2053-201ENST00000459295 91 ntBASIC2.7□□□□□ -1.98
LMX1BO60663 RN7SL20P-201ENST00000488827 297 ntBASIC2.7□□□□□ -1.98
LMX1BO60663 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.7□□□□□ -1.98
LMX1BO60663 AC096745.1-201ENST00000509945 370 ntBASIC2.7□□□□□ -1.98
LMX1BO60663 AL359273.1-201ENST00000510918 627 ntBASIC2.7□□□□□ -1.98
LMX1BO60663 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.7□□□□□ -1.98
LMX1BO60663 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.7□□□□□ -1.98
LMX1BO60663 DNAJC8P1-201ENST00000554535 372 ntBASIC2.7□□□□□ -1.98
LMX1BO60663 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.7□□□□□ -1.98
LMX1BO60663 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.7□□□□□ -1.98
LMX1BO60663 AC007938.3-201ENST00000604965 623 ntBASIC2.7□□□□□ -1.98
LMX1BO60663 AC016925.2-201ENST00000605108 242 ntBASIC2.7□□□□□ -1.98
LMX1BO60663 RNU6-85P-201ENST00000605989 107 ntBASIC2.7□□□□□ -1.98
LMX1BO60663 AL161423.1-201ENST00000613700 262 ntBASIC2.7□□□□□ -1.98
LMX1BO60663 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.7□□□□□ -1.98
LMX1BO60663 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
LMX1BO60663 HSP90AA4P-202ENST00000506915 2228 ntBASIC2.69□□□□□ -1.98
LMX1BO60663 Y_RNA.33-201ENST00000362591 102 ntBASIC2.69□□□□□ -1.98
LMX1BO60663 RNU6-1040P-201ENST00000383974 107 ntBASIC2.69□□□□□ -1.98
LMX1BO60663 RNU6-1181P-201ENST00000384191 106 ntBASIC2.69□□□□□ -1.98
LMX1BO60663 Y_RNA.463-201ENST00000384271 102 ntBASIC2.69□□□□□ -1.98
LMX1BO60663 Y_RNA.496-201ENST00000384444 101 ntBASIC2.69□□□□□ -1.98
LMX1BO60663 RNU6-1179P-201ENST00000384667 107 ntBASIC2.69□□□□□ -1.98
LMX1BO60663 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 423.7 ms