Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 NDUFB9P3-201ENST00000521269 501 ntBASIC4.29□□□□□ -1.72
SMARCA5O60264 RNU6-323P-201ENST00000521915 107 ntBASIC4.29□□□□□ -1.72
SMARCA5O60264 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC4.29□□□□□ -1.72
SMARCA5O60264 AC007458.1-201ENST00000542812 373 ntBASIC4.29□□□□□ -1.72
SMARCA5O60264 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC4.29□□□□□ -1.72
SMARCA5O60264 MIR3158-1-201ENST00000583596 81 ntBASIC4.29□□□□□ -1.72
SMARCA5O60264 RMST_4.1-201ENST00000616886 107 ntBASIC4.29□□□□□ -1.72
SMARCA5O60264 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SMARCA5O60264 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
SMARCA5O60264 AC092435.3-201ENST00000565538 3654 ntBASIC4.28□□□□□ -1.72
SMARCA5O60264 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.72
SMARCA5O60264 RNA5SP197-201ENST00000363357 119 ntBASIC4.28□□□□□ -1.72
SMARCA5O60264 RNU6-1109P-201ENST00000391187 107 ntBASIC4.28□□□□□ -1.72
SMARCA5O60264 RPL7P10-201ENST00000417407 739 ntBASIC4.28□□□□□ -1.72
SMARCA5O60264 TOMM20P4-201ENST00000427861 435 ntBASIC4.28□□□□□ -1.72
SMARCA5O60264 HMGN2P31-201ENST00000432430 273 ntBASIC4.28□□□□□ -1.72
SMARCA5O60264 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC4.28□□□□□ -1.72
SMARCA5O60264 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC4.28□□□□□ -1.72
SMARCA5O60264 MIR2276-201ENST00000516886 89 ntBASIC4.28□□□□□ -1.72
SMARCA5O60264 Y_RNA.721-201ENST00000517207 102 ntBASIC4.28□□□□□ -1.72
SMARCA5O60264 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC4.28□□□□□ -1.72
SMARCA5O60264 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC4.28□□□□□ -1.72
SMARCA5O60264 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC4.28□□□□□ -1.72
SMARCA5O60264 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.28□□□□□ -1.72
SMARCA5O60264 CYCSP39-201ENST00000565821 309 ntBASIC4.28□□□□□ -1.72
SMARCA5O60264 AC011494.1-201ENST00000596454 237 ntBASIC4.28□□□□□ -1.72
SMARCA5O60264 AC092447.9-201ENST00000603395 144 ntBASIC4.28□□□□□ -1.72
SMARCA5O60264 SNORD58B-201ENST00000607313 66 ntBASIC4.28□□□□□ -1.72
SMARCA5O60264 AC006133.1-201ENST00000617106 264 ntBASIC4.28□□□□□ -1.72
SMARCA5O60264 MIR6134-201ENST00000617606 109 ntBASIC4.28□□□□□ -1.72
SMARCA5O60264 U7.8-201ENST00000619968 63 ntBASIC4.28□□□□□ -1.72
SMARCA5O60264 AP003355.3-201ENST00000623465 114 ntBASIC4.28□□□□□ -1.72
SMARCA5O60264 MPP6-209ENST00000625307 126 ntTSL 5 BASIC4.28□□□□□ -1.72
SMARCA5O60264 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.28□□□□□ -1.72
SMARCA5O60264 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SMARCA5O60264 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SMARCA5O60264 ADAM3A-203ENST00000461344 2157 ntBASIC4.27□□□□□ -1.73
SMARCA5O60264 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
SMARCA5O60264 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SMARCA5O60264 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC4.27□□□□□ -1.73
SMARCA5O60264 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.27□□□□□ -1.73
SMARCA5O60264 MIR30E-201ENST00000362104 92 ntBASIC4.27□□□□□ -1.73
SMARCA5O60264 Y_RNA.389-201ENST00000383924 113 ntBASIC4.27□□□□□ -1.73
SMARCA5O60264 RNU6-128P-201ENST00000383976 107 ntBASIC4.27□□□□□ -1.73
SMARCA5O60264 MIR490-201ENST00000384865 128 ntBASIC4.27□□□□□ -1.73
SMARCA5O60264 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.27□□□□□ -1.73
SMARCA5O60264 RPS4XP7-201ENST00000406274 780 ntBASIC4.27□□□□□ -1.73
SMARCA5O60264 RNU2-3P-201ENST00000410144 191 ntBASIC4.27□□□□□ -1.73
SMARCA5O60264 RNU6-847P-201ENST00000411115 108 ntBASIC4.27□□□□□ -1.73
SMARCA5O60264 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC4.27□□□□□ -1.73
SMARCA5O60264 AC005300.1-201ENST00000428401 373 ntBASIC4.27□□□□□ -1.73
SMARCA5O60264 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC4.27□□□□□ -1.73
SMARCA5O60264 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.27□□□□□ -1.73
SMARCA5O60264 SNORD105B-201ENST00000458770 79 ntBASIC4.27□□□□□ -1.73
SMARCA5O60264 SNORD5.1-201ENST00000458800 75 ntBASIC4.27□□□□□ -1.73
SMARCA5O60264 AC104564.1-201ENST00000493028 407 ntBASIC4.27□□□□□ -1.73
SMARCA5O60264 AC093663.1-201ENST00000497190 394 ntBASIC4.27□□□□□ -1.73
SMARCA5O60264 AC116655.1-201ENST00000508324 901 ntBASIC4.27□□□□□ -1.73
SMARCA5O60264 RNU4-77P-201ENST00000516692 156 ntBASIC4.27□□□□□ -1.73
SMARCA5O60264 RNU1-54P-201ENST00000517181 120 ntBASIC4.27□□□□□ -1.73
SMARCA5O60264 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.27□□□□□ -1.73
SMARCA5O60264 AC021739.1-201ENST00000559631 174 ntBASIC4.27□□□□□ -1.73
SMARCA5O60264 AC026470.2-201ENST00000561492 181 ntBASIC4.27□□□□□ -1.73
SMARCA5O60264 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.27□□□□□ -1.73
SMARCA5O60264 LRRC37A5P-203ENST00000580181 585 ntBASIC4.27□□□□□ -1.73
SMARCA5O60264 AL451007.1-201ENST00000595491 289 ntBASIC4.27□□□□□ -1.73
SMARCA5O60264 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.27□□□□□ -1.73
SMARCA5O60264 HMGB1P24-202ENST00000615653 685 ntBASIC4.27□□□□□ -1.73
SMARCA5O60264 U2.1-201ENST00000618978 145 ntBASIC4.27□□□□□ -1.73
SMARCA5O60264 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.27□□□□□ -1.73
SMARCA5O60264 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
SMARCA5O60264 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.26□□□□□ -1.73
SMARCA5O60264 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SMARCA5O60264 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SMARCA5O60264 Y_RNA.396-201ENST00000383949 103 ntBASIC4.26□□□□□ -1.73
SMARCA5O60264 RNU6-823P-201ENST00000391042 103 ntBASIC4.26□□□□□ -1.73
SMARCA5O60264 PTMAP2-201ENST00000397627 327 ntBASIC4.26□□□□□ -1.73
SMARCA5O60264 RNU6-607P-201ENST00000411283 108 ntBASIC4.26□□□□□ -1.73
SMARCA5O60264 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC4.26□□□□□ -1.73
SMARCA5O60264 AL357552.1-201ENST00000445254 415 ntBASIC4.26□□□□□ -1.73
SMARCA5O60264 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC4.26□□□□□ -1.73
SMARCA5O60264 PCNPP5-201ENST00000452246 481 ntBASIC4.26□□□□□ -1.73
SMARCA5O60264 MRPS35P2-201ENST00000508242 191 ntBASIC4.26□□□□□ -1.73
SMARCA5O60264 MIR892C-201ENST00000516410 77 ntBASIC4.26□□□□□ -1.73
SMARCA5O60264 IGKV2-26-201ENST00000518305 343 ntBASIC4.26□□□□□ -1.73
SMARCA5O60264 AP005902.1-201ENST00000521358 186 ntBASIC4.26□□□□□ -1.73
SMARCA5O60264 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.26□□□□□ -1.73
SMARCA5O60264 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC4.26□□□□□ -1.73
SMARCA5O60264 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC4.26□□□□□ -1.73
SMARCA5O60264 AC005357.1-201ENST00000588399 301 ntBASIC4.26□□□□□ -1.73
SMARCA5O60264 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC4.26□□□□□ -1.73
SMARCA5O60264 AL161423.1-201ENST00000613700 262 ntBASIC4.26□□□□□ -1.73
SMARCA5O60264 AC110079.1-202ENST00000635213 138 ntBASIC4.26□□□□□ -1.73
SMARCA5O60264 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SMARCA5O60264 AP003122.5-201ENST00000527668 3766 ntBASIC4.26□□□□□ -1.73
SMARCA5O60264 AL513302.2-201ENST00000562313 1842 ntBASIC4.25□□□□□ -1.73
SMARCA5O60264 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC4.25□□□□□ -1.73
SMARCA5O60264 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.25□□□□□ -1.73
SMARCA5O60264 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.25□□□□□ -1.73
SMARCA5O60264 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms