Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 AL158042.1-201ENST00000605338 460 ntBASIC1.51□□□□□ -2.17
KDELR3O43731 AC080013.3-201ENST00000606839 578 ntBASIC1.51□□□□□ -2.17
KDELR3O43731 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.51□□□□□ -2.17
KDELR3O43731 RMST_6.1-201ENST00000611980 203 ntBASIC1.51□□□□□ -2.17
KDELR3O43731 AC024940.5-201ENST00000622889 474 ntBASIC1.51□□□□□ -2.17
KDELR3O43731 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
KDELR3O43731 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
KDELR3O43731 CBX3P1-201ENST00000325243 554 ntBASIC1.5□□□□□ -2.17
KDELR3O43731 RNU6-511P-201ENST00000363496 107 ntBASIC1.5□□□□□ -2.17
KDELR3O43731 RNU4-92P-201ENST00000363783 136 ntBASIC1.5□□□□□ -2.17
KDELR3O43731 RNU6-960P-201ENST00000364056 120 ntBASIC1.5□□□□□ -2.17
KDELR3O43731 RNU6-622P-201ENST00000384272 103 ntBASIC1.5□□□□□ -2.17
KDELR3O43731 RNU6-72P-201ENST00000384285 79 ntBASIC1.5□□□□□ -2.17
KDELR3O43731 RNU4-62P-201ENST00000410125 130 ntBASIC1.5□□□□□ -2.17
KDELR3O43731 AL354695.1-201ENST00000427935 228 ntBASIC1.5□□□□□ -2.17
KDELR3O43731 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC1.5□□□□□ -2.17
KDELR3O43731 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.5□□□□□ -2.17
KDELR3O43731 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
KDELR3O43731 ZNF736P4Y-201ENST00000454995 1243 ntBASIC1.5□□□□□ -2.17
KDELR3O43731 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.5□□□□□ -2.17
KDELR3O43731 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
KDELR3O43731 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC1.5□□□□□ -2.17
KDELR3O43731 AC025678.1-201ENST00000567861 338 ntBASIC1.5□□□□□ -2.17
KDELR3O43731 MTCYBP33-201ENST00000575007 1130 ntBASIC1.5□□□□□ -2.17
KDELR3O43731 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.5□□□□□ -2.17
KDELR3O43731 AL353778.1-201ENST00000603149 408 ntBASIC1.5□□□□□ -2.17
KDELR3O43731 AC112187.2-201ENST00000604345 283 ntBASIC1.5□□□□□ -2.17
KDELR3O43731 AP000860.1-201ENST00000605250 559 ntBASIC1.5□□□□□ -2.17
KDELR3O43731 AC144521.1-201ENST00000607148 956 ntBASIC1.5□□□□□ -2.17
KDELR3O43731 AC009269.6-201ENST00000621778 588 ntBASIC1.5□□□□□ -2.17
KDELR3O43731 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.5□□□□□ -2.17
KDELR3O43731 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.5□□□□□ -2.17
KDELR3O43731 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.5□□□□□ -2.17
KDELR3O43731 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
KDELR3O43731 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.5□□□□□ -2.17
KDELR3O43731 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.5□□□□□ -2.17
KDELR3O43731 OR4G2P-201ENST00000328113 903 ntBASIC1.49□□□□□ -2.17
KDELR3O43731 Y_RNA.99-201ENST00000363138 105 ntBASIC1.49□□□□□ -2.17
KDELR3O43731 RNA5SP390-201ENST00000410191 113 ntBASIC1.49□□□□□ -2.17
KDELR3O43731 RNU6-174P-201ENST00000410406 106 ntBASIC1.49□□□□□ -2.17
KDELR3O43731 PIGPP2-201ENST00000411569 458 ntBASIC1.49□□□□□ -2.17
KDELR3O43731 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.49□□□□□ -2.17
KDELR3O43731 AC092809.3-201ENST00000415453 231 ntBASIC1.49□□□□□ -2.17
KDELR3O43731 HMGB1P18-201ENST00000438801 619 ntBASIC1.49□□□□□ -2.17
KDELR3O43731 NDUFB1P2-201ENST00000449477 176 ntBASIC1.49□□□□□ -2.17
KDELR3O43731 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC1.49□□□□□ -2.17
KDELR3O43731 snoU13.14-201ENST00000459372 104 ntBASIC1.49□□□□□ -2.17
KDELR3O43731 AC119751.4-201ENST00000507498 357 ntBASIC1.49□□□□□ -2.17
KDELR3O43731 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.49□□□□□ -2.17
KDELR3O43731 Y_RNA.675-201ENST00000516389 149 ntBASIC1.49□□□□□ -2.17
KDELR3O43731 AC022880.1-201ENST00000534017 973 ntBASIC1.49□□□□□ -2.17
KDELR3O43731 AC135279.1-201ENST00000543493 504 ntBASIC1.49□□□□□ -2.17
KDELR3O43731 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.49□□□□□ -2.17
KDELR3O43731 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.49□□□□□ -2.17
KDELR3O43731 WISP1-OT1-201ENST00000602893 642 ntBASIC1.49□□□□□ -2.17
KDELR3O43731 AP000942.3-201ENST00000603702 160 ntBASIC1.49□□□□□ -2.17
KDELR3O43731 AL022154.1-201ENST00000604698 785 ntBASIC1.49□□□□□ -2.17
KDELR3O43731 AC016925.2-201ENST00000605108 242 ntBASIC1.49□□□□□ -2.17
KDELR3O43731 AC018645.2-201ENST00000609151 472 ntBASIC1.49□□□□□ -2.17
KDELR3O43731 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.49□□□□□ -2.17
KDELR3O43731 U6.42-201ENST00000618440 107 ntBASIC1.49□□□□□ -2.17
KDELR3O43731 AC007792.1-201ENST00000623023 402 ntBASIC1.49□□□□□ -2.17
KDELR3O43731 AC004808.1-201ENST00000627671 721 ntBASIC1.49□□□□□ -2.17
KDELR3O43731 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
KDELR3O43731 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.48□□□□□ -2.17
KDELR3O43731 RNA5SP432-201ENST00000362480 116 ntBASIC1.48□□□□□ -2.17
KDELR3O43731 Y_RNA.46-201ENST00000362695 102 ntBASIC1.48□□□□□ -2.17
KDELR3O43731 RNU6-942P-201ENST00000363002 107 ntBASIC1.48□□□□□ -2.17
KDELR3O43731 RNU6-433P-201ENST00000363216 104 ntBASIC1.48□□□□□ -2.17
KDELR3O43731 RNU6-1164P-201ENST00000364428 107 ntBASIC1.48□□□□□ -2.17
KDELR3O43731 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.48□□□□□ -2.17
KDELR3O43731 MIR320A-201ENST00000385302 82 ntBASIC1.48□□□□□ -2.17
KDELR3O43731 TRIM60P10Y-201ENST00000425589 751 ntBASIC1.48□□□□□ -2.17
KDELR3O43731 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.48□□□□□ -2.17
KDELR3O43731 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.48□□□□□ -2.17
KDELR3O43731 Y_RNA.689-201ENST00000516589 107 ntBASIC1.48□□□□□ -2.17
KDELR3O43731 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.48□□□□□ -2.17
KDELR3O43731 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC1.48□□□□□ -2.17
KDELR3O43731 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.48□□□□□ -2.17
KDELR3O43731 AC069431.2-201ENST00000604149 1099 ntBASIC1.48□□□□□ -2.17
KDELR3O43731 AL355816.2-201ENST00000610049 647 ntBASIC1.48□□□□□ -2.17
KDELR3O43731 AL359547.2-201ENST00000615810 418 ntBASIC1.48□□□□□ -2.17
KDELR3O43731 AC006338.1-201ENST00000618453 749 ntBASIC1.48□□□□□ -2.17
KDELR3O43731 ZNF680P1-201ENST00000436625 1469 ntBASIC1.48□□□□□ -2.17
KDELR3O43731 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
KDELR3O43731 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
KDELR3O43731 U8.1-201ENST00000362843 134 ntBASIC1.47□□□□□ -2.17
KDELR3O43731 Y_RNA.140-201ENST00000363474 103 ntBASIC1.47□□□□□ -2.17
KDELR3O43731 SNORA75B-201ENST00000384053 137 ntBASIC1.47□□□□□ -2.17
KDELR3O43731 SNORD116-20-201ENST00000384529 92 ntBASIC1.47□□□□□ -2.17
KDELR3O43731 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
KDELR3O43731 CISD1P1-201ENST00000393907 327 ntBASIC1.47□□□□□ -2.17
KDELR3O43731 AL590556.1-201ENST00000423231 483 ntBASIC1.47□□□□□ -2.17
KDELR3O43731 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC1.47□□□□□ -2.17
KDELR3O43731 RPL23AP30-201ENST00000432419 501 ntBASIC1.47□□□□□ -2.17
KDELR3O43731 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.47□□□□□ -2.17
KDELR3O43731 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.47□□□□□ -2.17
KDELR3O43731 AC096745.1-201ENST00000509945 370 ntBASIC1.47□□□□□ -2.17
KDELR3O43731 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.47□□□□□ -2.17
KDELR3O43731 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 147.2 ms