Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 FRG2DP-202ENST00000566967 323 ntBASIC2.95□□□□□ -1.94
LDB2O43679 OR1M4P-201ENST00000589199 287 ntBASIC2.95□□□□□ -1.94
LDB2O43679 AL355598.1-201ENST00000604169 202 ntBASIC2.95□□□□□ -1.94
LDB2O43679 AL137843.1-201ENST00000605078 385 ntBASIC2.95□□□□□ -1.94
LDB2O43679 AL353621.2-201ENST00000605340 133 ntBASIC2.95□□□□□ -1.94
LDB2O43679 AC008962.1-201ENST00000605729 304 ntBASIC2.95□□□□□ -1.94
LDB2O43679 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.95□□□□□ -1.94
LDB2O43679 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.95□□□□□ -1.94
LDB2O43679 AC006111.3-201ENST00000622137 383 ntBASIC2.95□□□□□ -1.94
LDB2O43679 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
LDB2O43679 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
LDB2O43679 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
LDB2O43679 RNU6-166P-201ENST00000384371 107 ntBASIC2.94□□□□□ -1.94
LDB2O43679 SNORA1.3-201ENST00000384676 136 ntBASIC2.94□□□□□ -1.94
LDB2O43679 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
LDB2O43679 RPS4XP3-201ENST00000398541 413 ntBASIC2.94□□□□□ -1.94
LDB2O43679 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.94□□□□□ -1.94
LDB2O43679 UBE2V1P4-201ENST00000425374 344 ntBASIC2.94□□□□□ -1.94
LDB2O43679 TRIAP1P1-201ENST00000427062 225 ntBASIC2.94□□□□□ -1.94
LDB2O43679 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.94□□□□□ -1.94
LDB2O43679 AC092798.1-201ENST00000458542 409 ntBASIC2.94□□□□□ -1.94
LDB2O43679 SNORA59A-201ENST00000459326 152 ntBASIC2.94□□□□□ -1.94
LDB2O43679 AC096745.1-201ENST00000509945 370 ntBASIC2.94□□□□□ -1.94
LDB2O43679 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.94□□□□□ -1.94
LDB2O43679 RNU6-703P-201ENST00000516946 107 ntBASIC2.94□□□□□ -1.94
LDB2O43679 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.94□□□□□ -1.94
LDB2O43679 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
LDB2O43679 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.94□□□□□ -1.94
LDB2O43679 EIF4BP1-201ENST00000554881 351 ntBASIC2.94□□□□□ -1.94
LDB2O43679 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.94□□□□□ -1.94
LDB2O43679 AMZ2P1-203ENST00000565833 850 ntBASIC2.94□□□□□ -1.94
LDB2O43679 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.94□□□□□ -1.94
LDB2O43679 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.94□□□□□ -1.94
LDB2O43679 AL133255.1-201ENST00000606374 441 ntBASIC2.94□□□□□ -1.94
LDB2O43679 AC002076.2-201ENST00000617362 122 ntBASIC2.94□□□□□ -1.94
LDB2O43679 AL137790.1-201ENST00000634283 177 ntBASIC2.94□□□□□ -1.94
LDB2O43679 U2.21-201ENST00000637295 81 ntBASIC2.94□□□□□ -1.94
LDB2O43679 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
LDB2O43679 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.94□□□□□ -1.94
LDB2O43679 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.94□□□□□ -1.94
LDB2O43679 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
LDB2O43679 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.93□□□□□ -1.94
LDB2O43679 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.93□□□□□ -1.94
LDB2O43679 RNU6-593P-201ENST00000364716 112 ntBASIC2.93□□□□□ -1.94
LDB2O43679 RNU6-1329P-201ENST00000365664 107 ntBASIC2.93□□□□□ -1.94
LDB2O43679 Y_RNA.482-201ENST00000384377 111 ntBASIC2.93□□□□□ -1.94
LDB2O43679 RNU6-1035P-201ENST00000384477 107 ntBASIC2.93□□□□□ -1.94
LDB2O43679 RNU6-95P-201ENST00000384697 107 ntBASIC2.93□□□□□ -1.94
LDB2O43679 MIR10A-201ENST00000385043 110 ntBASIC2.93□□□□□ -1.94
LDB2O43679 SAR1AP2-201ENST00000392696 594 ntBASIC2.93□□□□□ -1.94
LDB2O43679 ATG3P1-201ENST00000419507 911 ntBASIC2.93□□□□□ -1.94
LDB2O43679 MTCO2P27-201ENST00000420740 428 ntBASIC2.93□□□□□ -1.94
LDB2O43679 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.93□□□□□ -1.94
LDB2O43679 AL590632.1-201ENST00000424289 371 ntBASIC2.93□□□□□ -1.94
LDB2O43679 TOMM20P4-201ENST00000427861 435 ntBASIC2.93□□□□□ -1.94
LDB2O43679 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.93□□□□□ -1.94
LDB2O43679 MTATP6P7-201ENST00000453315 681 ntBASIC2.93□□□□□ -1.94
LDB2O43679 AP004217.1-201ENST00000480579 346 ntBASIC2.93□□□□□ -1.94
LDB2O43679 AC092436.3-201ENST00000511788 257 ntBASIC2.93□□□□□ -1.94
LDB2O43679 Y_RNA.701-201ENST00000516812 110 ntBASIC2.93□□□□□ -1.94
LDB2O43679 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.93□□□□□ -1.94
LDB2O43679 AL133393.1-201ENST00000603277 287 ntBASIC2.93□□□□□ -1.94
LDB2O43679 AC126177.8-201ENST00000618339 1015 ntBASIC2.93□□□□□ -1.94
LDB2O43679 AC010378.1-201ENST00000619270 362 ntBASIC2.93□□□□□ -1.94
LDB2O43679 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.93□□□□□ -1.94
LDB2O43679 AL359757.2-201ENST00000624309 274 ntBASIC2.93□□□□□ -1.94
LDB2O43679 GABRG2-229ENST00000641017 3628 ntBASIC2.93□□□□□ -1.94
LDB2O43679 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
LDB2O43679 MTND5P27-201ENST00000428871 1720 ntBASIC2.93□□□□□ -1.94
LDB2O43679 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
LDB2O43679 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
LDB2O43679 AP003122.5-201ENST00000527668 3766 ntBASIC2.92□□□□□ -1.94
LDB2O43679 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
LDB2O43679 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
LDB2O43679 Y_RNA.259-201ENST00000364619 101 ntBASIC2.92□□□□□ -1.94
LDB2O43679 RNU6-7-201ENST00000364784 107 ntBASIC2.92□□□□□ -1.94
LDB2O43679 Y_RNA.315-201ENST00000365117 102 ntBASIC2.92□□□□□ -1.94
LDB2O43679 RNU6-8-201ENST00000365467 107 ntBASIC2.92□□□□□ -1.94
LDB2O43679 XGY1-201ENST00000381172 446 ntBASIC2.92□□□□□ -1.94
LDB2O43679 Y_RNA.419-201ENST00000384041 102 ntBASIC2.92□□□□□ -1.94
LDB2O43679 MIR34A-201ENST00000385130 110 ntBASIC2.92□□□□□ -1.94
LDB2O43679 MIR888-201ENST00000401186 77 ntBASIC2.92□□□□□ -1.94
LDB2O43679 RNU6-370P-201ENST00000411008 104 ntBASIC2.92□□□□□ -1.94
LDB2O43679 RN7SKP58-201ENST00000411010 305 ntBASIC2.92□□□□□ -1.94
LDB2O43679 RPL26P27-201ENST00000414397 437 ntBASIC2.92□□□□□ -1.94
LDB2O43679 AL096701.2-201ENST00000416920 238 ntBASIC2.92□□□□□ -1.94
LDB2O43679 HMGN2P30-201ENST00000423237 256 ntBASIC2.92□□□□□ -1.94
LDB2O43679 AL645568.3-201ENST00000433683 316 ntBASIC2.92□□□□□ -1.94
LDB2O43679 RPS29P6-201ENST00000438196 145 ntBASIC2.92□□□□□ -1.94
LDB2O43679 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.92□□□□□ -1.94
LDB2O43679 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.92□□□□□ -1.94
LDB2O43679 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.92□□□□□ -1.94
LDB2O43679 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.92□□□□□ -1.94
LDB2O43679 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.92□□□□□ -1.94
LDB2O43679 AC006445.2-201ENST00000510061 472 ntBASIC2.92□□□□□ -1.94
LDB2O43679 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.92□□□□□ -1.94
LDB2O43679 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.92□□□□□ -1.94
LDB2O43679 H3F3AP1-201ENST00000559984 334 ntBASIC2.92□□□□□ -1.94
LDB2O43679 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.92□□□□□ -1.94
LDB2O43679 ELOCP5-201ENST00000604924 333 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms