Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.11□□□□□ -1.91
SMAD6O43541 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.11□□□□□ -1.91
SMAD6O43541 AC026782.1-201ENST00000512952 449 ntBASIC3.11□□□□□ -1.91
SMAD6O43541 Y_RNA.661-201ENST00000516003 99 ntBASIC3.11□□□□□ -1.91
SMAD6O43541 Y_RNA.670-201ENST00000516255 105 ntBASIC3.11□□□□□ -1.91
SMAD6O43541 RNU6-390P-201ENST00000516259 103 ntBASIC3.11□□□□□ -1.91
SMAD6O43541 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.11□□□□□ -1.91
SMAD6O43541 RNU6-764P-201ENST00000516396 105 ntBASIC3.11□□□□□ -1.91
SMAD6O43541 AP006587.4-201ENST00000526053 529 ntBASIC3.11□□□□□ -1.91
SMAD6O43541 AC110588.1-201ENST00000559699 137 ntBASIC3.11□□□□□ -1.91
SMAD6O43541 MTCO3P23-201ENST00000561363 289 ntBASIC3.11□□□□□ -1.91
SMAD6O43541 AC004817.2-201ENST00000561794 651 ntBASIC3.11□□□□□ -1.91
SMAD6O43541 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.11□□□□□ -1.91
SMAD6O43541 AC011471.1-201ENST00000585766 187 ntBASIC3.11□□□□□ -1.91
SMAD6O43541 BNIP3P16-201ENST00000589779 534 ntBASIC3.11□□□□□ -1.91
SMAD6O43541 AL355598.1-201ENST00000604169 202 ntBASIC3.11□□□□□ -1.91
SMAD6O43541 AC007619.2-201ENST00000605743 379 ntBASIC3.11□□□□□ -1.91
SMAD6O43541 AC107294.3-201ENST00000609211 526 ntBASIC3.11□□□□□ -1.91
SMAD6O43541 AC011890.2-201ENST00000613393 294 ntBASIC3.11□□□□□ -1.91
SMAD6O43541 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.11□□□□□ -1.91
SMAD6O43541 PISRT1.1-201ENST00000616930 107 ntBASIC3.11□□□□□ -1.91
SMAD6O43541 AC007998.5-201ENST00000622938 237 ntBASIC3.11□□□□□ -1.91
SMAD6O43541 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SMAD6O43541 AP003122.5-201ENST00000527668 3766 ntBASIC3.11□□□□□ -1.91
SMAD6O43541 HSPA8P4-201ENST00000511877 1920 ntBASIC3.11□□□□□ -1.91
SMAD6O43541 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
SMAD6O43541 AC233263.6-201ENST00000631132 1963 ntBASIC3.11□□□□□ -1.91
SMAD6O43541 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SMAD6O43541 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
SMAD6O43541 AC091564.4-201ENST00000533934 2194 ntBASIC3.1□□□□□ -1.91
SMAD6O43541 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
SMAD6O43541 RNA5SP139-201ENST00000364340 117 ntBASIC3.1□□□□□ -1.91
SMAD6O43541 SNORA71.1-201ENST00000364523 117 ntBASIC3.1□□□□□ -1.91
SMAD6O43541 Y_RNA.252-201ENST00000364556 101 ntBASIC3.1□□□□□ -1.91
SMAD6O43541 SNORA23-201ENST00000365128 182 ntBASIC3.1□□□□□ -1.91
SMAD6O43541 Y_RNA.364-201ENST00000365532 101 ntBASIC3.1□□□□□ -1.91
SMAD6O43541 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SMAD6O43541 RNU6-190P-201ENST00000384154 102 ntBASIC3.1□□□□□ -1.91
SMAD6O43541 RNU6-434P-201ENST00000384376 107 ntBASIC3.1□□□□□ -1.91
SMAD6O43541 RNY1P14-201ENST00000384426 108 ntBASIC3.1□□□□□ -1.91
SMAD6O43541 Y_RNA.557-201ENST00000384680 107 ntBASIC3.1□□□□□ -1.91
SMAD6O43541 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SMAD6O43541 Y_RNA.594-201ENST00000410373 140 ntBASIC3.1□□□□□ -1.91
SMAD6O43541 RNU6-1050P-201ENST00000410388 107 ntBASIC3.1□□□□□ -1.91
SMAD6O43541 HMGB3P2-201ENST00000411913 584 ntBASIC3.1□□□□□ -1.91
SMAD6O43541 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.1□□□□□ -1.91
SMAD6O43541 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.1□□□□□ -1.91
SMAD6O43541 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC3.1□□□□□ -1.91
SMAD6O43541 SNORA25.10-201ENST00000515926 124 ntBASIC3.1□□□□□ -1.91
SMAD6O43541 RNA5SP217-201ENST00000515959 91 ntBASIC3.1□□□□□ -1.91
SMAD6O43541 Y_RNA.689-201ENST00000516589 107 ntBASIC3.1□□□□□ -1.91
SMAD6O43541 Y_RNA.708-201ENST00000516950 96 ntBASIC3.1□□□□□ -1.91
SMAD6O43541 RNA5SP380-201ENST00000517190 98 ntBASIC3.1□□□□□ -1.91
SMAD6O43541 RNU6-323P-201ENST00000521915 107 ntBASIC3.1□□□□□ -1.91
SMAD6O43541 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
SMAD6O43541 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.1□□□□□ -1.91
SMAD6O43541 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC3.1□□□□□ -1.91
SMAD6O43541 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.1□□□□□ -1.91
SMAD6O43541 AL160281.1-201ENST00000605307 311 ntBASIC3.1□□□□□ -1.91
SMAD6O43541 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.1□□□□□ -1.91
SMAD6O43541 MIR6130-201ENST00000619419 109 ntBASIC3.1□□□□□ -1.91
SMAD6O43541 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.1□□□□□ -1.91
SMAD6O43541 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.1□□□□□ -1.91
SMAD6O43541 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
SMAD6O43541 AC073325.2-201ENST00000339545 159 ntBASIC3.09□□□□□ -1.91
SMAD6O43541 Y_RNA.149-201ENST00000363558 117 ntBASIC3.09□□□□□ -1.91
SMAD6O43541 RNU6-128P-201ENST00000383976 107 ntBASIC3.09□□□□□ -1.91
SMAD6O43541 RNU6-26P-201ENST00000383985 107 ntBASIC3.09□□□□□ -1.91
SMAD6O43541 Y_RNA.496-201ENST00000384444 101 ntBASIC3.09□□□□□ -1.91
SMAD6O43541 SNORA75.6-201ENST00000391318 127 ntBASIC3.09□□□□□ -1.91
SMAD6O43541 RPS4XP7-201ENST00000406274 780 ntBASIC3.09□□□□□ -1.91
SMAD6O43541 U3.42-201ENST00000408746 214 ntBASIC3.09□□□□□ -1.91
SMAD6O43541 MIR1289-1-201ENST00000408836 144 ntBASIC3.09□□□□□ -1.91
SMAD6O43541 AC096664.2-201ENST00000411843 406 ntBASIC3.09□□□□□ -1.91
SMAD6O43541 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.09□□□□□ -1.91
SMAD6O43541 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.09□□□□□ -1.91
SMAD6O43541 AL137014.1-201ENST00000420490 1226 ntBASIC3.09□□□□□ -1.91
SMAD6O43541 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.09□□□□□ -1.91
SMAD6O43541 TMEM167AP1-201ENST00000423409 219 ntBASIC3.09□□□□□ -1.91
SMAD6O43541 AC079780.1-201ENST00000428259 207 ntBASIC3.09□□□□□ -1.91
SMAD6O43541 AC236972.1-201ENST00000433225 199 ntBASIC3.09□□□□□ -1.91
SMAD6O43541 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.09□□□□□ -1.91
SMAD6O43541 NEFMP1-201ENST00000443423 1006 ntBASIC3.09□□□□□ -1.91
SMAD6O43541 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.09□□□□□ -1.91
SMAD6O43541 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.09□□□□□ -1.91
SMAD6O43541 AL031183.1-201ENST00000457667 207 ntBASIC3.09□□□□□ -1.91
SMAD6O43541 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.09□□□□□ -1.91
SMAD6O43541 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.09□□□□□ -1.91
SMAD6O43541 RNU6-56P-201ENST00000516986 93 ntBASIC3.09□□□□□ -1.91
SMAD6O43541 RNU1-54P-201ENST00000517181 120 ntBASIC3.09□□□□□ -1.91
SMAD6O43541 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.09□□□□□ -1.91
SMAD6O43541 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SMAD6O43541 AP002404.1-201ENST00000532005 451 ntBASIC3.09□□□□□ -1.91
SMAD6O43541 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.09□□□□□ -1.91
SMAD6O43541 AC022080.3-201ENST00000544433 482 ntBASIC3.09□□□□□ -1.91
SMAD6O43541 FAM60BP-201ENST00000578364 658 ntBASIC3.09□□□□□ -1.91
SMAD6O43541 AL451007.1-201ENST00000595491 289 ntBASIC3.09□□□□□ -1.91
SMAD6O43541 AC018462.2-201ENST00000605375 395 ntBASIC3.09□□□□□ -1.91
SMAD6O43541 AC006157.1-201ENST00000611750 366 ntBASIC3.09□□□□□ -1.91
SMAD6O43541 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms