Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 Y_RNA.708-201ENST00000516950 96 ntBASIC3.28□□□□□ -1.88
PHGDHO43175 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.28□□□□□ -1.88
PHGDHO43175 APOOP3-201ENST00000536787 586 ntBASIC3.28□□□□□ -1.88
PHGDHO43175 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.28□□□□□ -1.88
PHGDHO43175 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC3.28□□□□□ -1.88
PHGDHO43175 BNIP3P16-201ENST00000589779 534 ntBASIC3.28□□□□□ -1.88
PHGDHO43175 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.28□□□□□ -1.88
PHGDHO43175 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.28□□□□□ -1.88
PHGDHO43175 VN1R107P-201ENST00000601784 209 ntBASIC3.28□□□□□ -1.88
PHGDHO43175 AC019159.1-201ENST00000605094 187 ntBASIC3.28□□□□□ -1.88
PHGDHO43175 MIR3976-201ENST00000606807 139 ntBASIC3.28□□□□□ -1.88
PHGDHO43175 U1.23-201ENST00000610293 146 ntBASIC3.28□□□□□ -1.88
PHGDHO43175 uc_338.1-201ENST00000612113 180 ntBASIC3.28□□□□□ -1.88
PHGDHO43175 RNU1-68P-201ENST00000615382 146 ntBASIC3.28□□□□□ -1.88
PHGDHO43175 PISRT1.1-201ENST00000616930 107 ntBASIC3.28□□□□□ -1.88
PHGDHO43175 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.28□□□□□ -1.88
PHGDHO43175 U1.39-201ENST00000621562 146 ntBASIC3.28□□□□□ -1.88
PHGDHO43175 AC039056.2-201ENST00000622261 511 ntBASIC3.28□□□□□ -1.88
PHGDHO43175 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.28□□□□□ -1.88
PHGDHO43175 KPNA2P1-201ENST00000458289 1591 ntBASIC3.28□□□□□ -1.88
PHGDHO43175 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PHGDHO43175 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.28□□□□□ -1.88
PHGDHO43175 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PHGDHO43175 AL356274.2-201ENST00000624379 3752 ntBASIC3.28□□□□□ -1.88
PHGDHO43175 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.28□□□□□ -1.89
PHGDHO43175 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
PHGDHO43175 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
PHGDHO43175 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
PHGDHO43175 AC091564.4-201ENST00000533934 2194 ntBASIC3.27□□□□□ -1.89
PHGDHO43175 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
PHGDHO43175 RNU4-76P-201ENST00000364509 141 ntBASIC3.27□□□□□ -1.89
PHGDHO43175 Y_RNA.460-201ENST00000384255 102 ntBASIC3.27□□□□□ -1.89
PHGDHO43175 Y_RNA.473-201ENST00000384333 102 ntBASIC3.27□□□□□ -1.89
PHGDHO43175 RNU6-843P-201ENST00000384454 104 ntBASIC3.27□□□□□ -1.89
PHGDHO43175 MIR521-1-201ENST00000384902 87 ntBASIC3.27□□□□□ -1.89
PHGDHO43175 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
PHGDHO43175 RN7SKP111-201ENST00000410349 271 ntBASIC3.27□□□□□ -1.89
PHGDHO43175 Y_RNA.594-201ENST00000410373 140 ntBASIC3.27□□□□□ -1.89
PHGDHO43175 RNU6-1050P-201ENST00000410388 107 ntBASIC3.27□□□□□ -1.89
PHGDHO43175 RN7SKP27-201ENST00000410684 333 ntBASIC3.27□□□□□ -1.89
PHGDHO43175 MTND3P9-201ENST00000429526 346 ntBASIC3.27□□□□□ -1.89
PHGDHO43175 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.27□□□□□ -1.89
PHGDHO43175 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.27□□□□□ -1.89
PHGDHO43175 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.27□□□□□ -1.89
PHGDHO43175 AL358232.1-201ENST00000448030 501 ntBASIC3.27□□□□□ -1.89
PHGDHO43175 AC115115.1-201ENST00000449927 248 ntBASIC3.27□□□□□ -1.89
PHGDHO43175 AC133134.1-201ENST00000466800 359 ntBASIC3.27□□□□□ -1.89
PHGDHO43175 AC026782.1-201ENST00000512952 449 ntBASIC3.27□□□□□ -1.89
PHGDHO43175 SMURF2P1-201ENST00000514992 481 ntBASIC3.27□□□□□ -1.89
PHGDHO43175 ACA59.1-201ENST00000515966 143 ntBASIC3.27□□□□□ -1.89
PHGDHO43175 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.27□□□□□ -1.89
PHGDHO43175 AP005902.1-201ENST00000521358 186 ntBASIC3.27□□□□□ -1.89
PHGDHO43175 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.27□□□□□ -1.89
PHGDHO43175 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.27□□□□□ -1.89
PHGDHO43175 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.27□□□□□ -1.89
PHGDHO43175 CPDP1-201ENST00000579660 283 ntBASIC3.27□□□□□ -1.89
PHGDHO43175 MIR5690-201ENST00000583739 73 ntBASIC3.27□□□□□ -1.89
PHGDHO43175 AC044792.1-201ENST00000593294 196 ntBASIC3.27□□□□□ -1.89
PHGDHO43175 AL391813.1-201ENST00000603098 260 ntBASIC3.27□□□□□ -1.89
PHGDHO43175 AL162713.1-201ENST00000604480 262 ntBASIC3.27□□□□□ -1.89
PHGDHO43175 AC018889.1-201ENST00000605372 397 ntBASIC3.27□□□□□ -1.89
PHGDHO43175 AL627309.6-201ENST00000606857 840 ntBASIC3.27□□□□□ -1.89
PHGDHO43175 RNU6ATAC35P-201ENST00000609276 444 ntBASIC3.27□□□□□ -1.89
PHGDHO43175 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.27□□□□□ -1.89
PHGDHO43175 AC084781.2-201ENST00000615568 161 ntBASIC3.27□□□□□ -1.89
PHGDHO43175 AC126177.8-201ENST00000618339 1015 ntBASIC3.27□□□□□ -1.89
PHGDHO43175 AC024581.2-201ENST00000619986 252 ntBASIC3.27□□□□□ -1.89
PHGDHO43175 UCA1.1-201ENST00000620952 75 ntBASIC3.27□□□□□ -1.89
PHGDHO43175 AC090574.1-201ENST00000623186 233 ntBASIC3.27□□□□□ -1.89
PHGDHO43175 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
PHGDHO43175 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.26□□□□□ -1.89
PHGDHO43175 RBBP8P1-201ENST00000449447 1844 ntBASIC3.26□□□□□ -1.89
PHGDHO43175 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
PHGDHO43175 RNA5SP119-201ENST00000362715 117 ntBASIC3.26□□□□□ -1.89
PHGDHO43175 RNU6-1059P-201ENST00000363752 98 ntBASIC3.26□□□□□ -1.89
PHGDHO43175 RNU6-1188P-201ENST00000363795 107 ntBASIC3.26□□□□□ -1.89
PHGDHO43175 RNU1-140P-201ENST00000365040 165 ntBASIC3.26□□□□□ -1.89
PHGDHO43175 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
PHGDHO43175 SNORD116-29-201ENST00000384516 83 ntBASIC3.26□□□□□ -1.89
PHGDHO43175 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
PHGDHO43175 RNY4P36-201ENST00000391116 96 ntBASIC3.26□□□□□ -1.89
PHGDHO43175 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.26□□□□□ -1.89
PHGDHO43175 AL133396.1-201ENST00000432048 687 ntBASIC3.26□□□□□ -1.89
PHGDHO43175 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.26□□□□□ -1.89
PHGDHO43175 FTH1P25-201ENST00000447665 469 ntBASIC3.26□□□□□ -1.89
PHGDHO43175 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.26□□□□□ -1.89
PHGDHO43175 SNORD5.1-201ENST00000458800 75 ntBASIC3.26□□□□□ -1.89
PHGDHO43175 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.26□□□□□ -1.89
PHGDHO43175 AC008571.1-201ENST00000467232 300 ntBASIC3.26□□□□□ -1.89
PHGDHO43175 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.26□□□□□ -1.89
PHGDHO43175 AC114801.2-201ENST00000503825 781 ntBASIC3.26□□□□□ -1.89
PHGDHO43175 HMGN1P13-201ENST00000505795 138 ntBASIC3.26□□□□□ -1.89
PHGDHO43175 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.26□□□□□ -1.89
PHGDHO43175 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.26□□□□□ -1.89
PHGDHO43175 Y_RNA.701-201ENST00000516812 110 ntBASIC3.26□□□□□ -1.89
PHGDHO43175 Y_RNA.718-201ENST00000517110 102 ntBASIC3.26□□□□□ -1.89
PHGDHO43175 SNORA31.23-201ENST00000517219 133 ntBASIC3.26□□□□□ -1.89
PHGDHO43175 MIR4719-201ENST00000585233 84 ntBASIC3.26□□□□□ -1.89
PHGDHO43175 AP000654.2-201ENST00000605633 586 ntBASIC3.26□□□□□ -1.89
PHGDHO43175 AC009229.3-201ENST00000608056 282 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 137.7 ms