Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 AL139286.2-201ENST00000606838 396 ntBASIC1.74□□□□□ -2.13
CLOCKO15516 AL031775.1-201ENST00000607014 887 ntBASIC1.74□□□□□ -2.13
CLOCKO15516 AC012409.4-201ENST00000612923 249 ntBASIC1.74□□□□□ -2.13
CLOCKO15516 SCARNA4-202ENST00000625402 129 ntBASIC1.74□□□□□ -2.13
CLOCKO15516 AC092192.1-201ENST00000633154 1018 ntBASIC1.74□□□□□ -2.13
CLOCKO15516 RNU6-655P-201ENST00000362858 107 ntBASIC1.73□□□□□ -2.13
CLOCKO15516 RNU5F-6P-201ENST00000362979 116 ntBASIC1.73□□□□□ -2.13
CLOCKO15516 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
CLOCKO15516 RNA5SP390-201ENST00000410191 113 ntBASIC1.73□□□□□ -2.13
CLOCKO15516 RNU2-2P-201ENST00000410396 191 ntBASIC1.73□□□□□ -2.13
CLOCKO15516 RNU2-48P-201ENST00000410694 191 ntBASIC1.73□□□□□ -2.13
CLOCKO15516 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
CLOCKO15516 PGBD4P6-201ENST00000421501 610 ntBASIC1.73□□□□□ -2.13
CLOCKO15516 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.73□□□□□ -2.13
CLOCKO15516 MTCYBP39-201ENST00000437562 491 ntBASIC1.73□□□□□ -2.13
CLOCKO15516 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.73□□□□□ -2.13
CLOCKO15516 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.73□□□□□ -2.13
CLOCKO15516 Y_RNA.638-201ENST00000459374 113 ntBASIC1.73□□□□□ -2.13
CLOCKO15516 AL121594.1-201ENST00000475906 575 ntBASIC1.73□□□□□ -2.13
CLOCKO15516 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.73□□□□□ -2.13
CLOCKO15516 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.73□□□□□ -2.13
CLOCKO15516 AP003181.2-201ENST00000528941 181 ntBASIC1.73□□□□□ -2.13
CLOCKO15516 OR5AL2P-201ENST00000532185 920 ntBASIC1.73□□□□□ -2.13
CLOCKO15516 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.73□□□□□ -2.13
CLOCKO15516 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.73□□□□□ -2.13
CLOCKO15516 MIR4419B-201ENST00000577260 68 ntBASIC1.73□□□□□ -2.13
CLOCKO15516 DEFB131E-202ENST00000602581 683 ntBASIC1.73□□□□□ -2.13
CLOCKO15516 U2.15-201ENST00000611544 191 ntBASIC1.73□□□□□ -2.13
CLOCKO15516 U2.16-201ENST00000613119 191 ntBASIC1.73□□□□□ -2.13
CLOCKO15516 AC016597.2-201ENST00000613256 341 ntBASIC1.73□□□□□ -2.13
CLOCKO15516 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.73□□□□□ -2.13
CLOCKO15516 U2.12-201ENST00000613778 191 ntBASIC1.73□□□□□ -2.13
CLOCKO15516 U2.20-201ENST00000613956 192 ntBASIC1.73□□□□□ -2.13
CLOCKO15516 U2.9-201ENST00000615427 191 ntBASIC1.73□□□□□ -2.13
CLOCKO15516 U2.11-201ENST00000616345 191 ntBASIC1.73□□□□□ -2.13
CLOCKO15516 U2.2-201ENST00000616535 191 ntBASIC1.73□□□□□ -2.13
CLOCKO15516 AL359314.1-201ENST00000616913 261 ntBASIC1.73□□□□□ -2.13
CLOCKO15516 U2.3-201ENST00000617785 191 ntBASIC1.73□□□□□ -2.13
CLOCKO15516 AC092140.2-201ENST00000618027 521 ntBASIC1.73□□□□□ -2.13
CLOCKO15516 U2.19-201ENST00000618602 191 ntBASIC1.73□□□□□ -2.13
CLOCKO15516 RNU2-1-201ENST00000618664 191 ntBASIC1.73□□□□□ -2.13
CLOCKO15516 AL353997.5-201ENST00000618886 171 ntBASIC1.73□□□□□ -2.13
CLOCKO15516 U2.6-201ENST00000619225 191 ntBASIC1.73□□□□□ -2.13
CLOCKO15516 U2.5-201ENST00000619465 191 ntBASIC1.73□□□□□ -2.13
CLOCKO15516 U2.10-201ENST00000620268 191 ntBASIC1.73□□□□□ -2.13
CLOCKO15516 RNU6-611P-201ENST00000384276 104 ntBASIC1.72□□□□□ -2.13
CLOCKO15516 SNORD116-20-201ENST00000384529 92 ntBASIC1.72□□□□□ -2.13
CLOCKO15516 RNU6-1274P-201ENST00000384557 107 ntBASIC1.72□□□□□ -2.13
CLOCKO15516 MIR29C-201ENST00000385231 88 ntBASIC1.72□□□□□ -2.13
CLOCKO15516 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
CLOCKO15516 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.72□□□□□ -2.13
CLOCKO15516 CISD1P1-201ENST00000393907 327 ntBASIC1.72□□□□□ -2.13
CLOCKO15516 MRPL42P2-201ENST00000403169 426 ntBASIC1.72□□□□□ -2.13
CLOCKO15516 RNU2-23P-201ENST00000410545 195 ntBASIC1.72□□□□□ -2.13
CLOCKO15516 RNU2-32P-201ENST00000411193 191 ntBASIC1.72□□□□□ -2.13
CLOCKO15516 AL512286.1-201ENST00000439244 400 ntBASIC1.72□□□□□ -2.13
CLOCKO15516 USP9YP15-201ENST00000442391 422 ntBASIC1.72□□□□□ -2.13
CLOCKO15516 Z73417.1-201ENST00000447373 778 ntBASIC1.72□□□□□ -2.13
CLOCKO15516 AC104058.1-201ENST00000448028 297 ntBASIC1.72□□□□□ -2.13
CLOCKO15516 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.72□□□□□ -2.13
CLOCKO15516 AC006026.2-201ENST00000457376 180 ntBASIC1.72□□□□□ -2.13
CLOCKO15516 SNORD11.1-201ENST00000459482 85 ntBASIC1.72□□□□□ -2.13
CLOCKO15516 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
CLOCKO15516 AC108078.2-201ENST00000510750 236 ntBASIC1.72□□□□□ -2.13
CLOCKO15516 RNU6-123P-201ENST00000516163 102 ntBASIC1.72□□□□□ -2.13
CLOCKO15516 AP003461.1-201ENST00000528866 78 ntBASIC1.72□□□□□ -2.13
CLOCKO15516 ELOCP32-201ENST00000548625 324 ntBASIC1.72□□□□□ -2.13
CLOCKO15516 MIR5697-201ENST00000578045 78 ntBASIC1.72□□□□□ -2.13
CLOCKO15516 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC1.72□□□□□ -2.13
CLOCKO15516 AC009977.1-201ENST00000586015 570 ntBASIC1.72□□□□□ -2.13
CLOCKO15516 CLIC4P2-201ENST00000601934 717 ntBASIC1.72□□□□□ -2.13
CLOCKO15516 AL353778.1-201ENST00000603149 408 ntBASIC1.72□□□□□ -2.13
CLOCKO15516 BNIP3P10-201ENST00000605360 577 ntBASIC1.72□□□□□ -2.13
CLOCKO15516 AC090517.3-201ENST00000625170 141 ntBASIC1.72□□□□□ -2.13
CLOCKO15516 AC007671.2-201ENST00000637344 619 ntBASIC1.72□□□□□ -2.13
CLOCKO15516 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.72□□□□□ -2.13
CLOCKO15516 FARSBP1-201ENST00000435808 1778 ntBASIC1.72□□□□□ -2.13
CLOCKO15516 OR4G2P-201ENST00000328113 903 ntBASIC1.71□□□□□ -2.14
CLOCKO15516 RNU6-500P-201ENST00000362349 107 ntBASIC1.71□□□□□ -2.14
CLOCKO15516 RNU6-1210P-201ENST00000363775 107 ntBASIC1.71□□□□□ -2.14
CLOCKO15516 SNORD48-201ENST00000364953 64 ntBASIC1.71□□□□□ -2.14
CLOCKO15516 RNU6-546P-201ENST00000383991 107 ntBASIC1.71□□□□□ -2.14
CLOCKO15516 RNU6-39P-201ENST00000384344 107 ntBASIC1.71□□□□□ -2.14
CLOCKO15516 RNU6-1179P-201ENST00000384667 107 ntBASIC1.71□□□□□ -2.14
CLOCKO15516 RNU6-482P-201ENST00000391068 107 ntBASIC1.71□□□□□ -2.14
CLOCKO15516 SNORA40.18-201ENST00000391200 128 ntBASIC1.71□□□□□ -2.14
CLOCKO15516 CBX3P9-201ENST00000402326 552 ntBASIC1.71□□□□□ -2.14
CLOCKO15516 AL356432.1-201ENST00000405809 419 ntBASIC1.71□□□□□ -2.14
CLOCKO15516 AL031779.1-201ENST00000415663 330 ntBASIC1.71□□□□□ -2.14
CLOCKO15516 AC074117.2-201ENST00000417130 397 ntBASIC1.71□□□□□ -2.14
CLOCKO15516 AC244636.1-201ENST00000421152 228 ntBASIC1.71□□□□□ -2.14
CLOCKO15516 AL365400.1-201ENST00000431854 640 ntBASIC1.71□□□□□ -2.14
CLOCKO15516 MTND2P29-201ENST00000438595 412 ntBASIC1.71□□□□□ -2.14
CLOCKO15516 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.71□□□□□ -2.14
CLOCKO15516 MTND5P2-201ENST00000442927 1142 ntBASIC1.71□□□□□ -2.14
CLOCKO15516 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC1.71□□□□□ -2.14
CLOCKO15516 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.71□□□□□ -2.14
CLOCKO15516 BZW1P2-201ENST00000473537 826 ntBASIC1.71□□□□□ -2.14
CLOCKO15516 MTND2P14-201ENST00000482139 351 ntBASIC1.71□□□□□ -2.14
CLOCKO15516 RPL23AP63-201ENST00000498752 471 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 134.9 ms