Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC0.13□□□□□ -2.39
CHKB-CPT1BH3BT56 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC0.13□□□□□ -2.39
CHKB-CPT1BH3BT56 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC0.13□□□□□ -2.39
CHKB-CPT1BH3BT56 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.13□□□□□ -2.39
CHKB-CPT1BH3BT56 AL590229.1-201ENST00000603497 542 ntBASIC0.13□□□□□ -2.39
CHKB-CPT1BH3BT56 AC123767.1-202ENST00000620407 817 ntBASIC0.13□□□□□ -2.39
CHKB-CPT1BH3BT56 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.13□□□□□ -2.39
CHKB-CPT1BH3BT56 AC019226.1-201ENST00000625666 515 ntBASIC0.13□□□□□ -2.39
CHKB-CPT1BH3BT56 U6.99-201ENST00000637524 83 ntBASIC0.13□□□□□ -2.39
CHKB-CPT1BH3BT56 AC010615.1-201ENST00000594254 1764 ntBASIC0.12□□□□□ -2.39
CHKB-CPT1BH3BT56 RNU6-898P-201ENST00000365627 104 ntBASIC0.12□□□□□ -2.39
CHKB-CPT1BH3BT56 MIR942-201ENST00000401111 86 ntBASIC0.12□□□□□ -2.39
CHKB-CPT1BH3BT56 AL590084.2-201ENST00000401481 382 ntBASIC0.12□□□□□ -2.39
CHKB-CPT1BH3BT56 CBX3P9-201ENST00000402326 552 ntBASIC0.12□□□□□ -2.39
CHKB-CPT1BH3BT56 AL133264.1-201ENST00000407157 562 ntBASIC0.12□□□□□ -2.39
CHKB-CPT1BH3BT56 MTCO2P12-201ENST00000427426 682 ntBASIC0.12□□□□□ -2.39
CHKB-CPT1BH3BT56 RAB28P5-201ENST00000427490 651 ntBASIC0.12□□□□□ -2.39
CHKB-CPT1BH3BT56 GTF2IP3-201ENST00000433887 494 ntBASIC0.12□□□□□ -2.39
CHKB-CPT1BH3BT56 AL008629.1-201ENST00000438615 184 ntBASIC0.12□□□□□ -2.39
CHKB-CPT1BH3BT56 MTCO3P18-201ENST00000440206 761 ntBASIC0.12□□□□□ -2.39
CHKB-CPT1BH3BT56 NDUFAF4P2-201ENST00000445374 520 ntBASIC0.12□□□□□ -2.39
CHKB-CPT1BH3BT56 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC0.12□□□□□ -2.39
CHKB-CPT1BH3BT56 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
CHKB-CPT1BH3BT56 OFD1P3Y-201ENST00000453312 783 ntBASIC0.12□□□□□ -2.39
CHKB-CPT1BH3BT56 RNU6-333P-201ENST00000459117 107 ntBASIC0.12□□□□□ -2.39
CHKB-CPT1BH3BT56 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC0.12□□□□□ -2.39
CHKB-CPT1BH3BT56 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.12□□□□□ -2.39
CHKB-CPT1BH3BT56 MTCO3P7-201ENST00000510008 774 ntBASIC0.12□□□□□ -2.39
CHKB-CPT1BH3BT56 SNORA31.2-201ENST00000516019 134 ntBASIC0.12□□□□□ -2.39
CHKB-CPT1BH3BT56 SNORD79.1-201ENST00000516069 84 ntBASIC0.12□□□□□ -2.39
CHKB-CPT1BH3BT56 RN7SKP265-201ENST00000516448 223 ntBASIC0.12□□□□□ -2.39
CHKB-CPT1BH3BT56 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC0.12□□□□□ -2.39
CHKB-CPT1BH3BT56 AC133794.1-201ENST00000602731 914 ntBASIC0.12□□□□□ -2.39
CHKB-CPT1BH3BT56 DLEU1_1.1-201ENST00000618107 190 ntBASIC0.12□□□□□ -2.39
CHKB-CPT1BH3BT56 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.12□□□□□ -2.39
CHKB-CPT1BH3BT56 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC0.12□□□□□ -2.39
CHKB-CPT1BH3BT56 SNORA63D-201ENST00000364359 132 ntBASIC0.11□□□□□ -2.39
CHKB-CPT1BH3BT56 SNORA11.1-201ENST00000408133 129 ntBASIC0.11□□□□□ -2.39
CHKB-CPT1BH3BT56 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.11□□□□□ -2.39
CHKB-CPT1BH3BT56 AL139421.1-201ENST00000423010 169 ntBASIC0.11□□□□□ -2.39
CHKB-CPT1BH3BT56 OOSP1P1-201ENST00000423265 274 ntBASIC0.11□□□□□ -2.39
CHKB-CPT1BH3BT56 AC099677.2-201ENST00000436385 175 ntBASIC0.11□□□□□ -2.39
CHKB-CPT1BH3BT56 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC0.11□□□□□ -2.39
CHKB-CPT1BH3BT56 AC005840.1-201ENST00000498412 377 ntBASIC0.11□□□□□ -2.39
CHKB-CPT1BH3BT56 AC118282.2-201ENST00000508739 374 ntBASIC0.11□□□□□ -2.39
CHKB-CPT1BH3BT56 AC110760.3-202ENST00000515177 371 ntBASIC0.11□□□□□ -2.39
CHKB-CPT1BH3BT56 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC0.11□□□□□ -2.39
CHKB-CPT1BH3BT56 RN7SKP12-201ENST00000516275 143 ntBASIC0.11□□□□□ -2.39
CHKB-CPT1BH3BT56 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.11□□□□□ -2.39
CHKB-CPT1BH3BT56 AC104417.1-201ENST00000523974 751 ntBASIC0.11□□□□□ -2.39
CHKB-CPT1BH3BT56 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC0.11□□□□□ -2.39
CHKB-CPT1BH3BT56 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.11□□□□□ -2.39
CHKB-CPT1BH3BT56 HSPE1P4-201ENST00000550617 308 ntBASIC0.11□□□□□ -2.39
CHKB-CPT1BH3BT56 AC137800.2-201ENST00000574375 120 ntBASIC0.11□□□□□ -2.39
CHKB-CPT1BH3BT56 MIR4782-201ENST00000577987 79 ntBASIC0.11□□□□□ -2.39
CHKB-CPT1BH3BT56 AC068790.6-201ENST00000602558 258 ntBASIC0.11□□□□□ -2.39
CHKB-CPT1BH3BT56 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC0.11□□□□□ -2.39
CHKB-CPT1BH3BT56 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC0.11□□□□□ -2.39
CHKB-CPT1BH3BT56 AC008759.3-201ENST00000613300 508 ntBASIC0.11□□□□□ -2.39
CHKB-CPT1BH3BT56 AC107905.1-201ENST00000616204 426 ntBASIC0.11□□□□□ -2.39
CHKB-CPT1BH3BT56 AL163051.2-201ENST00000618976 735 ntBASIC0.11□□□□□ -2.39
CHKB-CPT1BH3BT56 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC0.11□□□□□ -2.39
CHKB-CPT1BH3BT56 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC0.1□□□□□ -2.39
CHKB-CPT1BH3BT56 AC009541.1-201ENST00000438279 2662 ntBASIC0.1□□□□□ -2.39
CHKB-CPT1BH3BT56 SNORD114-27-201ENST00000363766 70 ntBASIC0.1□□□□□ -2.39
CHKB-CPT1BH3BT56 Y_RNA.234-201ENST00000364409 97 ntBASIC0.1□□□□□ -2.39
CHKB-CPT1BH3BT56 RNU6-331P-201ENST00000384724 107 ntBASIC0.1□□□□□ -2.39
CHKB-CPT1BH3BT56 RNU6-1237P-201ENST00000384777 107 ntBASIC0.1□□□□□ -2.39
CHKB-CPT1BH3BT56 FTH1P15-201ENST00000406984 280 ntBASIC0.1□□□□□ -2.39
CHKB-CPT1BH3BT56 MIR1261-201ENST00000408659 82 ntBASIC0.1□□□□□ -2.39
CHKB-CPT1BH3BT56 AC092423.1-201ENST00000430165 186 ntBASIC0.1□□□□□ -2.39
CHKB-CPT1BH3BT56 AL035398.1-201ENST00000430869 322 ntBASIC0.1□□□□□ -2.39
CHKB-CPT1BH3BT56 MTND5P8-201ENST00000449817 1083 ntBASIC0.1□□□□□ -2.39
CHKB-CPT1BH3BT56 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.1□□□□□ -2.39
CHKB-CPT1BH3BT56 DEFB108E-201ENST00000524692 240 ntBASIC0.1□□□□□ -2.39
CHKB-CPT1BH3BT56 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC0.1□□□□□ -2.39
CHKB-CPT1BH3BT56 APOOP3-201ENST00000536787 586 ntBASIC0.1□□□□□ -2.39
CHKB-CPT1BH3BT56 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC0.1□□□□□ -2.39
CHKB-CPT1BH3BT56 BNIP3P33-201ENST00000598912 569 ntBASIC0.1□□□□□ -2.39
CHKB-CPT1BH3BT56 AC069114.2-201ENST00000604699 304 ntBASIC0.1□□□□□ -2.39
CHKB-CPT1BH3BT56 AL390208.1-201ENST00000605885 644 ntBASIC0.1□□□□□ -2.39
CHKB-CPT1BH3BT56 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC0.1□□□□□ -2.39
CHKB-CPT1BH3BT56 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC0.1□□□□□ -2.39
CHKB-CPT1BH3BT56 RMST_4.1-201ENST00000616886 107 ntBASIC0.1□□□□□ -2.39
CHKB-CPT1BH3BT56 AC009268.2-201ENST00000621925 457 ntBASIC0.1□□□□□ -2.39
CHKB-CPT1BH3BT56 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.1□□□□□ -2.39
CHKB-CPT1BH3BT56 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC0.09□□□□□ -2.4
CHKB-CPT1BH3BT56 RNU6-1210P-201ENST00000363775 107 ntBASIC0.09□□□□□ -2.4
CHKB-CPT1BH3BT56 RNU6-969P-201ENST00000383900 105 ntBASIC0.09□□□□□ -2.4
CHKB-CPT1BH3BT56 RNU6-1054P-201ENST00000411293 104 ntBASIC0.09□□□□□ -2.4
CHKB-CPT1BH3BT56 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC0.09□□□□□ -2.4
CHKB-CPT1BH3BT56 ELOCP3-201ENST00000439303 348 ntBASIC0.09□□□□□ -2.4
CHKB-CPT1BH3BT56 AC002542.1-201ENST00000440683 193 ntBASIC0.09□□□□□ -2.4
CHKB-CPT1BH3BT56 RAD1P2-201ENST00000446414 663 ntBASIC0.09□□□□□ -2.4
CHKB-CPT1BH3BT56 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.09□□□□□ -2.4
CHKB-CPT1BH3BT56 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC0.09□□□□□ -2.4
CHKB-CPT1BH3BT56 AC008837.2-201ENST00000513076 418 ntBASIC0.09□□□□□ -2.4
CHKB-CPT1BH3BT56 SNORD60.2-201ENST00000516883 86 ntBASIC0.09□□□□□ -2.4
CHKB-CPT1BH3BT56 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.09□□□□□ -2.4
CHKB-CPT1BH3BT56 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC0.09□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms