Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC0.01□□□□□ -2.41
COL6A5A8TX70 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC0.01□□□□□ -2.41
COL6A5A8TX70 MIR3609-201ENST00000582661 80 ntBASIC0.01□□□□□ -2.41
COL6A5A8TX70 AC018462.2-201ENST00000605375 395 ntBASIC0.01□□□□□ -2.41
COL6A5A8TX70 AL596245.1-201ENST00000618994 362 ntBASIC0.01□□□□□ -2.41
COL6A5A8TX70 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.01□□□□□ -2.41
COL6A5A8TX70 AC027309.3-201ENST00000623419 351 ntBASIC0.01□□□□□ -2.41
COL6A5A8TX70 ZNF204P-201ENST00000416749 2397 ntBASIC0.01□□□□□ -2.41
COL6A5A8TX70 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0□□□□□ -2.41
COL6A5A8TX70 USP9YP26-201ENST00000421008 661 ntBASIC0□□□□□ -2.41
COL6A5A8TX70 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC0□□□□□ -2.41
COL6A5A8TX70 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC0□□□□□ -2.41
COL6A5A8TX70 USP9YP17-201ENST00000444617 696 ntBASIC0□□□□□ -2.41
COL6A5A8TX70 AC013267.1-201ENST00000458227 267 ntBASIC0□□□□□ -2.41
COL6A5A8TX70 RNA5SP137-201ENST00000516833 135 ntBASIC0□□□□□ -2.41
COL6A5A8TX70 AP003034.1-201ENST00000534621 422 ntBASIC0□□□□□ -2.41
COL6A5A8TX70 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC0□□□□□ -2.41
COL6A5A8TX70 AC098614.4-201ENST00000607601 462 ntBASIC0□□□□□ -2.41
COL6A5A8TX70 MIR411-201ENST00000362239 96 ntBASIC0□□□□□ -2.41
COL6A5A8TX70 Y_RNA.53-201ENST00000362765 102 ntBASIC0□□□□□ -2.41
COL6A5A8TX70 RNA5SP128-201ENST00000365305 116 ntBASIC0□□□□□ -2.41
COL6A5A8TX70 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC0□□□□□ -2.41
COL6A5A8TX70 AL049545.1-201ENST00000401856 572 ntBASIC0□□□□□ -2.41
COL6A5A8TX70 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC0□□□□□ -2.41
COL6A5A8TX70 AC245047.7-201ENST00000440265 293 ntBASIC0□□□□□ -2.41
COL6A5A8TX70 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC0□□□□□ -2.41
COL6A5A8TX70 TRBVA-201ENST00000498804 316 ntBASIC0□□□□□ -2.41
COL6A5A8TX70 RNVU1-2-201ENST00000516326 135 ntBASIC0□□□□□ -2.41
COL6A5A8TX70 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC0□□□□□ -2.41
COL6A5A8TX70 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC0□□□□□ -2.41
COL6A5A8TX70 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC0□□□□□ -2.41
COL6A5A8TX70 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0□□□□□ -2.41
COL6A5A8TX70 AL079343.1-201ENST00000572358 1771 ntBASIC0□□□□□ -2.41
COL6A5A8TX70 ZNF680P1-201ENST00000436625 1469 ntBASIC-0□□□□□ -2.41
COL6A5A8TX70 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC-0□□□□□ -2.41
COL6A5A8TX70 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC-0□□□□□ -2.41
COL6A5A8TX70 AL359385.1-201ENST00000456509 365 ntBASIC-0□□□□□ -2.41
COL6A5A8TX70 MTCYBP16-201ENST00000509187 1129 ntBASIC-0□□□□□ -2.41
COL6A5A8TX70 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC-0□□□□□ -2.41
COL6A5A8TX70 ZNF92P3-201ENST00000596594 954 ntBASIC-0□□□□□ -2.41
COL6A5A8TX70 AC091912.2-201ENST00000624798 167 ntBASIC-0□□□□□ -2.41
COL6A5A8TX70 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.01□□□□□ -2.41
COL6A5A8TX70 RNU6-657P-201ENST00000383904 107 ntBASIC-0.01□□□□□ -2.41
COL6A5A8TX70 RNU6-1237P-201ENST00000384777 107 ntBASIC-0.01□□□□□ -2.41
COL6A5A8TX70 HMGN2P34-201ENST00000437647 269 ntBASIC-0.01□□□□□ -2.41
COL6A5A8TX70 MTCYBP3-201ENST00000445588 1137 ntBASIC-0.01□□□□□ -2.41
COL6A5A8TX70 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC-0.01□□□□□ -2.41
COL6A5A8TX70 MTCYBP22-201ENST00000603788 447 ntBASIC-0.01□□□□□ -2.41
COL6A5A8TX70 AC139769.3-201ENST00000618383 175 ntBASIC-0.01□□□□□ -2.41
COL6A5A8TX70 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC-0.01□□□□□ -2.41
COL6A5A8TX70 RNU6-945P-201ENST00000383947 107 ntBASIC-0.01□□□□□ -2.41
COL6A5A8TX70 Y_RNA.452-201ENST00000384202 108 ntBASIC-0.01□□□□□ -2.41
COL6A5A8TX70 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC-0.01□□□□□ -2.41
COL6A5A8TX70 AC114981.1-201ENST00000503897 678 ntBASIC-0.01□□□□□ -2.41
COL6A5A8TX70 RNU6-1121P-201ENST00000516802 109 ntBASIC-0.01□□□□□ -2.41
COL6A5A8TX70 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC-0.01□□□□□ -2.41
COL6A5A8TX70 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC-0.01□□□□□ -2.41
COL6A5A8TX70 AL136520.1-202ENST00000555494 763 ntBASIC-0.01□□□□□ -2.41
COL6A5A8TX70 MED28P6-201ENST00000558776 231 ntBASIC-0.01□□□□□ -2.41
COL6A5A8TX70 MIR3937-201ENST00000580135 106 ntBASIC-0.01□□□□□ -2.41
COL6A5A8TX70 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC-0.01□□□□□ -2.41
COL6A5A8TX70 MIR19B1-201ENST00000384829 87 ntBASIC-0.02□□□□□ -2.41
COL6A5A8TX70 MIR605-201ENST00000385078 83 ntBASIC-0.02□□□□□ -2.41
COL6A5A8TX70 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC-0.02□□□□□ -2.41
COL6A5A8TX70 snoU13.25-201ENST00000458945 104 ntBASIC-0.02□□□□□ -2.41
COL6A5A8TX70 AC004923.2-201ENST00000529649 369 ntBASIC-0.02□□□□□ -2.41
COL6A5A8TX70 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC-0.02□□□□□ -2.41
COL6A5A8TX70 MTND2P17-201ENST00000550281 688 ntBASIC-0.02□□□□□ -2.41
COL6A5A8TX70 AL022345.2-201ENST00000606307 135 ntBASIC-0.02□□□□□ -2.41
COL6A5A8TX70 U4atac.1-201ENST00000618345 95 ntBASIC-0.02□□□□□ -2.41
COL6A5A8TX70 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-0.02□□□□□ -2.41
COL6A5A8TX70 AL049737.1-201ENST00000413920 1403 ntBASIC-0.02□□□□□ -2.41
COL6A5A8TX70 RNA5SP219-201ENST00000390940 113 ntBASIC-0.02□□□□□ -2.41
COL6A5A8TX70 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC-0.02□□□□□ -2.41
COL6A5A8TX70 RPS15AP10-201ENST00000432472 382 ntBASIC-0.02□□□□□ -2.41
COL6A5A8TX70 MRPL42P4-201ENST00000453267 443 ntBASIC-0.02□□□□□ -2.41
COL6A5A8TX70 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC-0.02□□□□□ -2.41
COL6A5A8TX70 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC-0.02□□□□□ -2.41
COL6A5A8TX70 RNU6ATAC13P-201ENST00000516152 131 ntBASIC-0.02□□□□□ -2.41
COL6A5A8TX70 PCNAP1-202ENST00000595299 752 ntBASIC-0.02□□□□□ -2.41
COL6A5A8TX70 AC040896.1-201ENST00000613819 479 ntBASIC-0.02□□□□□ -2.41
COL6A5A8TX70 AL360181.4-201ENST00000621752 134 ntBASIC-0.02□□□□□ -2.41
COL6A5A8TX70 AL513185.3-201ENST00000433335 1300 ntBASIC-0.03□□□□□ -2.41
COL6A5A8TX70 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC-0.03□□□□□ -2.41
COL6A5A8TX70 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC-0.03□□□□□ -2.41
COL6A5A8TX70 Y_RNA.533-201ENST00000384596 114 ntBASIC-0.03□□□□□ -2.41
COL6A5A8TX70 AC092809.3-201ENST00000415453 231 ntBASIC-0.03□□□□□ -2.41
COL6A5A8TX70 RPS26P5-201ENST00000418544 335 ntBASIC-0.03□□□□□ -2.41
COL6A5A8TX70 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC-0.03□□□□□ -2.41
COL6A5A8TX70 MTND2P8-201ENST00000450555 1025 ntBASIC-0.03□□□□□ -2.41
COL6A5A8TX70 RNU7-23P-201ENST00000459465 62 ntBASIC-0.03□□□□□ -2.41
COL6A5A8TX70 HMSD-204ENST00000526932 162 ntTSL 3 BASIC-0.03□□□□□ -2.41
COL6A5A8TX70 AC023050.3-201ENST00000541142 333 ntBASIC-0.03□□□□□ -2.41
COL6A5A8TX70 AC080013.4-201ENST00000607624 649 ntBASIC-0.03□□□□□ -2.41
COL6A5A8TX70 MIR6864-201ENST00000617935 70 ntBASIC-0.03□□□□□ -2.41
COL6A5A8TX70 USP12-203ENST00000620323 349 ntTSL 3 BASIC-0.03□□□□□ -2.41
COL6A5A8TX70 OR5AK4P-201ENST00000635912 903 ntBASIC-0.03□□□□□ -2.41
COL6A5A8TX70 AL669831.1-202ENST00000428504 417 ntBASIC-0.04□□□□□ -2.42
COL6A5A8TX70 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC-0.04□□□□□ -2.42
COL6A5A8TX70 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC-0.04□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms