Protein–RNA interactions for Protein: A6NCW0

USP17L3, Ubiquitin carboxyl-terminal hydrolase 17-like protein 3, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L3A6NCW0 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.86□□□□□ -1.63
USP17L3A6NCW0 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
USP17L3A6NCW0 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
USP17L3A6NCW0 OFD1P6Y-202ENST00000451061 2724 ntBASIC4.86□□□□□ -1.63
USP17L3A6NCW0 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
USP17L3A6NCW0 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
USP17L3A6NCW0 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
USP17L3A6NCW0 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
USP17L3A6NCW0 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC4.85□□□□□ -1.63
USP17L3A6NCW0 Y_RNA.44-201ENST00000362676 108 ntBASIC4.85□□□□□ -1.63
USP17L3A6NCW0 RNU5B-2P-201ENST00000363036 113 ntBASIC4.85□□□□□ -1.63
USP17L3A6NCW0 SNORD35B-201ENST00000363660 87 ntBASIC4.85□□□□□ -1.63
USP17L3A6NCW0 RNU6-137P-201ENST00000363680 108 ntBASIC4.85□□□□□ -1.63
USP17L3A6NCW0 Y_RNA.199-201ENST00000364014 102 ntBASIC4.85□□□□□ -1.63
USP17L3A6NCW0 RNU6-886P-201ENST00000384319 105 ntBASIC4.85□□□□□ -1.63
USP17L3A6NCW0 Y_RNA.504-201ENST00000384481 104 ntBASIC4.85□□□□□ -1.63
USP17L3A6NCW0 RNA5SP213-201ENST00000391031 106 ntBASIC4.85□□□□□ -1.63
USP17L3A6NCW0 RNU5A-5P-201ENST00000411054 116 ntBASIC4.85□□□□□ -1.63
USP17L3A6NCW0 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC4.85□□□□□ -1.63
USP17L3A6NCW0 AC007969.2-201ENST00000441891 191 ntBASIC4.85□□□□□ -1.63
USP17L3A6NCW0 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.85□□□□□ -1.63
USP17L3A6NCW0 Y_RNA.644-201ENST00000459006 113 ntBASIC4.85□□□□□ -1.63
USP17L3A6NCW0 MRPL42P6-201ENST00000486397 371 ntBASIC4.85□□□□□ -1.63
USP17L3A6NCW0 AC016632.1-201ENST00000503994 196 ntBASIC4.85□□□□□ -1.63
USP17L3A6NCW0 RNU6-513P-201ENST00000516104 104 ntBASIC4.85□□□□□ -1.63
USP17L3A6NCW0 RNU1-95P-201ENST00000516357 160 ntBASIC4.85□□□□□ -1.63
USP17L3A6NCW0 Y_RNA.674-201ENST00000516362 113 ntBASIC4.85□□□□□ -1.63
USP17L3A6NCW0 RN7SKP49-201ENST00000516675 260 ntBASIC4.85□□□□□ -1.63
USP17L3A6NCW0 RNU1-128P-201ENST00000516704 160 ntBASIC4.85□□□□□ -1.63
USP17L3A6NCW0 AC027288.2-201ENST00000553028 243 ntBASIC4.85□□□□□ -1.63
USP17L3A6NCW0 AL138963.2-201ENST00000605137 226 ntBASIC4.85□□□□□ -1.63
USP17L3A6NCW0 AC005296.1-201ENST00000616145 209 ntBASIC4.85□□□□□ -1.63
USP17L3A6NCW0 SNORA43.4-201ENST00000629559 138 ntBASIC4.85□□□□□ -1.63
USP17L3A6NCW0 AC009093.8-201ENST00000641769 292 ntBASIC4.85□□□□□ -1.63
USP17L3A6NCW0 PCAT14-202ENST00000627127 3935 ntBASIC4.85□□□□□ -1.63
USP17L3A6NCW0 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
USP17L3A6NCW0 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.85□□□□□ -1.63
USP17L3A6NCW0 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.85□□□□□ -1.63
USP17L3A6NCW0 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
USP17L3A6NCW0 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
USP17L3A6NCW0 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
USP17L3A6NCW0 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
USP17L3A6NCW0 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
USP17L3A6NCW0 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
USP17L3A6NCW0 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
USP17L3A6NCW0 RNA5SP361-201ENST00000362686 118 ntBASIC4.84□□□□□ -1.63
USP17L3A6NCW0 RNU6-21P-201ENST00000384710 107 ntBASIC4.84□□□□□ -1.63
USP17L3A6NCW0 SNORA3.3-201ENST00000408712 125 ntBASIC4.84□□□□□ -1.63
USP17L3A6NCW0 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.84□□□□□ -1.63
USP17L3A6NCW0 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC4.84□□□□□ -1.63
USP17L3A6NCW0 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC4.84□□□□□ -1.63
USP17L3A6NCW0 RPL23AP83-201ENST00000434984 473 ntBASIC4.84□□□□□ -1.63
USP17L3A6NCW0 GPM6BP3-201ENST00000442797 145 ntBASIC4.84□□□□□ -1.63
USP17L3A6NCW0 AC026784.1-201ENST00000507986 352 ntBASIC4.84□□□□□ -1.63
USP17L3A6NCW0 AC026726.1-201ENST00000512859 601 ntBASIC4.84□□□□□ -1.63
USP17L3A6NCW0 RNU6-406P-201ENST00000516470 107 ntBASIC4.84□□□□□ -1.63
USP17L3A6NCW0 RNU6-1198P-201ENST00000516904 67 ntBASIC4.84□□□□□ -1.63
USP17L3A6NCW0 IGHVII-62-1-201ENST00000519283 235 ntBASIC4.84□□□□□ -1.63
USP17L3A6NCW0 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
USP17L3A6NCW0 YPEL5P3-201ENST00000547227 352 ntBASIC4.84□□□□□ -1.63
USP17L3A6NCW0 HSPE1P4-201ENST00000550617 308 ntBASIC4.84□□□□□ -1.63
USP17L3A6NCW0 NACAP3-201ENST00000552100 481 ntBASIC4.84□□□□□ -1.63
USP17L3A6NCW0 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.84□□□□□ -1.63
USP17L3A6NCW0 MIR5695-201ENST00000579717 85 ntBASIC4.84□□□□□ -1.63
USP17L3A6NCW0 AL034408.1-202ENST00000636088 415 ntBASIC4.84□□□□□ -1.63
USP17L3A6NCW0 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
USP17L3A6NCW0 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
USP17L3A6NCW0 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
USP17L3A6NCW0 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
USP17L3A6NCW0 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC4.84□□□□□ -1.64
USP17L3A6NCW0 AC083843.3-201ENST00000623679 2186 ntBASIC4.84□□□□□ -1.64
USP17L3A6NCW0 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
USP17L3A6NCW0 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
USP17L3A6NCW0 RNU6-1141P-201ENST00000364520 107 ntBASIC4.83□□□□□ -1.64
USP17L3A6NCW0 RNU6-326P-201ENST00000365480 107 ntBASIC4.83□□□□□ -1.64
USP17L3A6NCW0 SNORA5A-201ENST00000384111 134 ntBASIC4.83□□□□□ -1.64
USP17L3A6NCW0 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
USP17L3A6NCW0 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC4.83□□□□□ -1.64
USP17L3A6NCW0 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.83□□□□□ -1.64
USP17L3A6NCW0 AL645939.1-201ENST00000453429 797 ntBASIC4.83□□□□□ -1.64
USP17L3A6NCW0 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.83□□□□□ -1.64
USP17L3A6NCW0 SNRPGP7-201ENST00000469016 106 ntBASIC4.83□□□□□ -1.64
USP17L3A6NCW0 AC084357.1-201ENST00000473404 255 ntBASIC4.83□□□□□ -1.64
USP17L3A6NCW0 RPS27AP10-201ENST00000496103 208 ntBASIC4.83□□□□□ -1.64
USP17L3A6NCW0 AC006499.6-201ENST00000511169 607 ntBASIC4.83□□□□□ -1.64
USP17L3A6NCW0 RNU2-31P-201ENST00000516954 155 ntBASIC4.83□□□□□ -1.64
USP17L3A6NCW0 AK6P2-201ENST00000549020 471 ntBASIC4.83□□□□□ -1.64
USP17L3A6NCW0 MIR5571-201ENST00000577998 113 ntBASIC4.83□□□□□ -1.64
USP17L3A6NCW0 MIR3690-201ENST00000580266 75 ntBASIC4.83□□□□□ -1.64
USP17L3A6NCW0 AC019176.2-201ENST00000611579 315 ntBASIC4.83□□□□□ -1.64
USP17L3A6NCW0 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.83□□□□□ -1.64
USP17L3A6NCW0 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
USP17L3A6NCW0 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
USP17L3A6NCW0 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.83□□□□□ -1.64
USP17L3A6NCW0 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
USP17L3A6NCW0 MAPK10-349ENST00000641767 3661 ntBASIC4.83□□□□□ -1.64
USP17L3A6NCW0 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
USP17L3A6NCW0 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
USP17L3A6NCW0 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
USP17L3A6NCW0 AC010733.2-201ENST00000589496 5702 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 128.8 ms