Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 AC243994.1-201ENST00000618627 109 ntBASIC0.2□□□□□ -2.38
CNOT1A5YKK6 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.2□□□□□ -2.38
CNOT1A5YKK6 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC0.19□□□□□ -2.38
CNOT1A5YKK6 RNU6-884P-201ENST00000363889 107 ntBASIC0.19□□□□□ -2.38
CNOT1A5YKK6 RNU6-31P-201ENST00000384388 108 ntBASIC0.19□□□□□ -2.38
CNOT1A5YKK6 RNU6-750P-201ENST00000390946 107 ntBASIC0.19□□□□□ -2.38
CNOT1A5YKK6 MIR938-201ENST00000401216 83 ntBASIC0.19□□□□□ -2.38
CNOT1A5YKK6 RNA5SP501-201ENST00000410990 112 ntBASIC0.19□□□□□ -2.38
CNOT1A5YKK6 OFD1P2Y-201ENST00000421895 1149 ntBASIC0.19□□□□□ -2.38
CNOT1A5YKK6 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.19□□□□□ -2.38
CNOT1A5YKK6 SNORD57-201ENST00000448188 72 ntBASIC0.19□□□□□ -2.38
CNOT1A5YKK6 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.19□□□□□ -2.38
CNOT1A5YKK6 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC0.19□□□□□ -2.38
CNOT1A5YKK6 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.19□□□□□ -2.38
CNOT1A5YKK6 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
CNOT1A5YKK6 MIR1302-8-201ENST00000408342 128 ntBASIC0.19□□□□□ -2.38
CNOT1A5YKK6 RN7SKP142-201ENST00000411236 328 ntBASIC0.19□□□□□ -2.38
CNOT1A5YKK6 UBE2V1P4-201ENST00000425374 344 ntBASIC0.19□□□□□ -2.38
CNOT1A5YKK6 AC112492.4-201ENST00000456549 352 ntBASIC0.19□□□□□ -2.38
CNOT1A5YKK6 RPL21P47-201ENST00000483696 477 ntBASIC0.19□□□□□ -2.38
CNOT1A5YKK6 CYCSP27-201ENST00000527643 293 ntBASIC0.19□□□□□ -2.38
CNOT1A5YKK6 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC0.19□□□□□ -2.38
CNOT1A5YKK6 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC0.19□□□□□ -2.38
CNOT1A5YKK6 AL162730.1-201ENST00000605734 292 ntBASIC0.19□□□□□ -2.38
CNOT1A5YKK6 AP005229.2-201ENST00000609980 697 ntBASIC0.19□□□□□ -2.38
CNOT1A5YKK6 MIR19B1-201ENST00000384829 87 ntBASIC0.18□□□□□ -2.38
CNOT1A5YKK6 MIR10B-201ENST00000385011 110 ntBASIC0.18□□□□□ -2.38
CNOT1A5YKK6 MIR1290-201ENST00000408735 78 ntBASIC0.18□□□□□ -2.38
CNOT1A5YKK6 MTND4LP10-201ENST00000435146 291 ntBASIC0.18□□□□□ -2.38
CNOT1A5YKK6 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.18□□□□□ -2.38
CNOT1A5YKK6 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.18□□□□□ -2.38
CNOT1A5YKK6 RNA5SP327-201ENST00000362494 101 ntBASIC0.18□□□□□ -2.38
CNOT1A5YKK6 RNU6-486P-201ENST00000363116 107 ntBASIC0.18□□□□□ -2.38
CNOT1A5YKK6 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.18□□□□□ -2.38
CNOT1A5YKK6 AL121578.1-201ENST00000428051 892 ntBASIC0.18□□□□□ -2.38
CNOT1A5YKK6 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC0.18□□□□□ -2.38
CNOT1A5YKK6 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC0.18□□□□□ -2.38
CNOT1A5YKK6 RPL36AP48-201ENST00000485521 314 ntBASIC0.18□□□□□ -2.38
CNOT1A5YKK6 AC025465.4-201ENST00000513422 638 ntBASIC0.18□□□□□ -2.38
CNOT1A5YKK6 Y_RNA.659-201ENST00000515994 113 ntBASIC0.18□□□□□ -2.38
CNOT1A5YKK6 AP001893.2-201ENST00000526949 202 ntBASIC0.18□□□□□ -2.38
CNOT1A5YKK6 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC0.18□□□□□ -2.38
CNOT1A5YKK6 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC0.18□□□□□ -2.38
CNOT1A5YKK6 FARSBP1-201ENST00000435808 1778 ntBASIC0.17□□□□□ -2.38
CNOT1A5YKK6 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.17□□□□□ -2.38
CNOT1A5YKK6 AL355615.1-201ENST00000406187 641 ntBASIC0.17□□□□□ -2.38
CNOT1A5YKK6 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC0.17□□□□□ -2.38
CNOT1A5YKK6 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC0.17□□□□□ -2.38
CNOT1A5YKK6 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC0.17□□□□□ -2.38
CNOT1A5YKK6 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.17□□□□□ -2.38
CNOT1A5YKK6 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC0.17□□□□□ -2.38
CNOT1A5YKK6 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC0.17□□□□□ -2.38
CNOT1A5YKK6 EIF1P4-201ENST00000572664 335 ntBASIC0.17□□□□□ -2.38
CNOT1A5YKK6 AC021851.1-201ENST00000608537 1082 ntBASIC0.17□□□□□ -2.38
CNOT1A5YKK6 RNU2-43P-201ENST00000410306 190 ntBASIC0.17□□□□□ -2.38
CNOT1A5YKK6 RNU6-1064P-201ENST00000410626 104 ntBASIC0.17□□□□□ -2.38
CNOT1A5YKK6 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC0.17□□□□□ -2.38
CNOT1A5YKK6 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC0.17□□□□□ -2.38
CNOT1A5YKK6 TRBVA-201ENST00000498804 316 ntBASIC0.17□□□□□ -2.38
CNOT1A5YKK6 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC0.17□□□□□ -2.38
CNOT1A5YKK6 AC018659.1-201ENST00000551083 169 ntBASIC0.17□□□□□ -2.38
CNOT1A5YKK6 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC0.17□□□□□ -2.38
CNOT1A5YKK6 MIR378F-201ENST00000578143 78 ntBASIC0.17□□□□□ -2.38
CNOT1A5YKK6 AC093788.1-201ENST00000609356 927 ntBASIC0.17□□□□□ -2.38
CNOT1A5YKK6 FTX_3.1-201ENST00000610451 147 ntBASIC0.17□□□□□ -2.38
CNOT1A5YKK6 Y_RNA.804-201ENST00000615262 101 ntBASIC0.17□□□□□ -2.38
CNOT1A5YKK6 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.17□□□□□ -2.38
CNOT1A5YKK6 ZNF663P-202ENST00000641770 1131 ntBASIC0.17□□□□□ -2.38
CNOT1A5YKK6 MTND5P31-201ENST00000419366 1374 ntBASIC0.16□□□□□ -2.38
CNOT1A5YKK6 RNA5SP361-201ENST00000362686 118 ntBASIC0.16□□□□□ -2.38
CNOT1A5YKK6 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.16□□□□□ -2.38
CNOT1A5YKK6 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.16□□□□□ -2.38
CNOT1A5YKK6 COPS8P3-201ENST00000526024 482 ntBASIC0.16□□□□□ -2.38
CNOT1A5YKK6 AC141557.1-201ENST00000540982 400 ntBASIC0.16□□□□□ -2.38
CNOT1A5YKK6 MIR5093-201ENST00000583199 100 ntBASIC0.16□□□□□ -2.38
CNOT1A5YKK6 AC068790.6-201ENST00000602558 258 ntBASIC0.16□□□□□ -2.38
CNOT1A5YKK6 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.16□□□□□ -2.38
CNOT1A5YKK6 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.16□□□□□ -2.38
CNOT1A5YKK6 AC007490.1-201ENST00000624321 703 ntBASIC0.16□□□□□ -2.38
CNOT1A5YKK6 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.16□□□□□ -2.38
CNOT1A5YKK6 SNORD49B-201ENST00000365172 72 ntBASIC0.16□□□□□ -2.38
CNOT1A5YKK6 MIR605-201ENST00000385078 83 ntBASIC0.16□□□□□ -2.38
CNOT1A5YKK6 NCOR1P3-201ENST00000420479 303 ntBASIC0.16□□□□□ -2.38
CNOT1A5YKK6 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC0.16□□□□□ -2.38
CNOT1A5YKK6 AP1S2P1-201ENST00000457344 379 ntBASIC0.16□□□□□ -2.38
CNOT1A5YKK6 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC0.16□□□□□ -2.38
CNOT1A5YKK6 AC074198.2-201ENST00000508153 258 ntBASIC0.16□□□□□ -2.38
CNOT1A5YKK6 RNU6-1256P-201ENST00000516539 103 ntBASIC0.16□□□□□ -2.38
CNOT1A5YKK6 AL590705.4-201ENST00000532209 134 ntBASIC0.16□□□□□ -2.38
CNOT1A5YKK6 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC0.16□□□□□ -2.38
CNOT1A5YKK6 AC091489.2-201ENST00000566263 604 ntBASIC0.16□□□□□ -2.38
CNOT1A5YKK6 BNIP3P23-201ENST00000599655 511 ntBASIC0.16□□□□□ -2.38
CNOT1A5YKK6 AL161729.4-201ENST00000604650 476 ntBASIC0.16□□□□□ -2.38
CNOT1A5YKK6 Z82243.1-201ENST00000609432 473 ntBASIC0.16□□□□□ -2.38
CNOT1A5YKK6 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.15□□□□□ -2.39
CNOT1A5YKK6 RNU5E-1-201ENST00000362477 120 ntBASIC0.15□□□□□ -2.39
CNOT1A5YKK6 SNORA25B-201ENST00000365507 128 ntBASIC0.15□□□□□ -2.39
CNOT1A5YKK6 Y_RNA.447-201ENST00000384184 113 ntBASIC0.15□□□□□ -2.39
CNOT1A5YKK6 Y_RNA.514-201ENST00000384528 112 ntBASIC0.15□□□□□ -2.39
CNOT1A5YKK6 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.15□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms