Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC0.45□□□□□ -2.34
TCRBV3S1A0A5B6 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC0.45□□□□□ -2.34
TCRBV3S1A0A5B6 AC104629.1-201ENST00000494226 508 ntBASIC0.45□□□□□ -2.34
TCRBV3S1A0A5B6 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.45□□□□□ -2.34
TCRBV3S1A0A5B6 AC093809.1-201ENST00000509155 340 ntBASIC0.45□□□□□ -2.34
TCRBV3S1A0A5B6 SNORA31.3-201ENST00000516029 96 ntBASIC0.45□□□□□ -2.34
TCRBV3S1A0A5B6 RN7SKP256-201ENST00000517201 314 ntBASIC0.45□□□□□ -2.34
TCRBV3S1A0A5B6 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC0.45□□□□□ -2.34
TCRBV3S1A0A5B6 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC0.45□□□□□ -2.34
TCRBV3S1A0A5B6 MIR4782-201ENST00000577987 79 ntBASIC0.45□□□□□ -2.34
TCRBV3S1A0A5B6 MIR5094-201ENST00000578766 85 ntBASIC0.45□□□□□ -2.34
TCRBV3S1A0A5B6 AL353997.4-201ENST00000586196 166 ntBASIC0.45□□□□□ -2.34
TCRBV3S1A0A5B6 AC025754.2-201ENST00000606491 432 ntBASIC0.45□□□□□ -2.34
TCRBV3S1A0A5B6 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.45□□□□□ -2.34
TCRBV3S1A0A5B6 AC040896.1-201ENST00000613819 479 ntBASIC0.45□□□□□ -2.34
TCRBV3S1A0A5B6 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.45□□□□□ -2.34
TCRBV3S1A0A5B6 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.45□□□□□ -2.34
TCRBV3S1A0A5B6 PCF11-AS1-201ENST00000602322 1516 ntBASIC0.44□□□□□ -2.34
TCRBV3S1A0A5B6 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
TCRBV3S1A0A5B6 Y_RNA.40-201ENST00000362645 93 ntBASIC0.44□□□□□ -2.34
TCRBV3S1A0A5B6 RNU6-97P-201ENST00000363387 104 ntBASIC0.44□□□□□ -2.34
TCRBV3S1A0A5B6 RNU6-432P-201ENST00000384196 109 ntBASIC0.44□□□□□ -2.34
TCRBV3S1A0A5B6 MIR608-201ENST00000384820 100 ntBASIC0.44□□□□□ -2.34
TCRBV3S1A0A5B6 MIR19B1-201ENST00000384829 87 ntBASIC0.44□□□□□ -2.34
TCRBV3S1A0A5B6 RNU6-952P-201ENST00000391164 108 ntBASIC0.44□□□□□ -2.34
TCRBV3S1A0A5B6 AC138623.1-201ENST00000418060 216 ntBASIC0.44□□□□□ -2.34
TCRBV3S1A0A5B6 AC083875.1-201ENST00000419509 405 ntBASIC0.44□□□□□ -2.34
TCRBV3S1A0A5B6 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC0.44□□□□□ -2.34
TCRBV3S1A0A5B6 Z82205.1-201ENST00000428456 297 ntBASIC0.44□□□□□ -2.34
TCRBV3S1A0A5B6 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC0.44□□□□□ -2.34
TCRBV3S1A0A5B6 GXYLT1P1-201ENST00000446657 490 ntBASIC0.44□□□□□ -2.34
TCRBV3S1A0A5B6 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC0.44□□□□□ -2.34
TCRBV3S1A0A5B6 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC0.44□□□□□ -2.34
TCRBV3S1A0A5B6 AC114981.1-201ENST00000503897 678 ntBASIC0.44□□□□□ -2.34
TCRBV3S1A0A5B6 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.44□□□□□ -2.34
TCRBV3S1A0A5B6 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.44□□□□□ -2.34
TCRBV3S1A0A5B6 AP000942.3-201ENST00000603702 160 ntBASIC0.44□□□□□ -2.34
TCRBV3S1A0A5B6 AL450270.1-201ENST00000606160 391 ntBASIC0.44□□□□□ -2.34
TCRBV3S1A0A5B6 AC120349.3-201ENST00000624377 529 ntBASIC0.44□□□□□ -2.34
TCRBV3S1A0A5B6 AC120349.2-201ENST00000625002 298 ntBASIC0.44□□□□□ -2.34
TCRBV3S1A0A5B6 AC099654.9-201ENST00000637055 678 ntBASIC0.44□□□□□ -2.34
TCRBV3S1A0A5B6 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
TCRBV3S1A0A5B6 AC092447.10-201ENST00000620607 1652 ntBASIC0.43□□□□□ -2.34
TCRBV3S1A0A5B6 Y_RNA.255-201ENST00000364581 97 ntBASIC0.43□□□□□ -2.34
TCRBV3S1A0A5B6 RNU6-1065P-201ENST00000384513 106 ntBASIC0.43□□□□□ -2.34
TCRBV3S1A0A5B6 MIR194-1-201ENST00000384892 85 ntBASIC0.43□□□□□ -2.34
TCRBV3S1A0A5B6 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.43□□□□□ -2.34
TCRBV3S1A0A5B6 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC0.43□□□□□ -2.34
TCRBV3S1A0A5B6 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC0.43□□□□□ -2.34
TCRBV3S1A0A5B6 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC0.43□□□□□ -2.34
TCRBV3S1A0A5B6 SNRPEP7-201ENST00000438350 220 ntBASIC0.43□□□□□ -2.34
TCRBV3S1A0A5B6 AL353752.1-201ENST00000454946 260 ntBASIC0.43□□□□□ -2.34
TCRBV3S1A0A5B6 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.43□□□□□ -2.34
TCRBV3S1A0A5B6 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.43□□□□□ -2.34
TCRBV3S1A0A5B6 LAMTOR3P2-201ENST00000504479 232 ntBASIC0.43□□□□□ -2.34
TCRBV3S1A0A5B6 AC034244.1-201ENST00000507687 207 ntBASIC0.43□□□□□ -2.34
TCRBV3S1A0A5B6 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.43□□□□□ -2.34
TCRBV3S1A0A5B6 RNA5SP437-201ENST00000517249 129 ntBASIC0.43□□□□□ -2.34
TCRBV3S1A0A5B6 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.43□□□□□ -2.34
TCRBV3S1A0A5B6 AC023538.1-201ENST00000534576 736 ntBASIC0.43□□□□□ -2.34
TCRBV3S1A0A5B6 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.43□□□□□ -2.34
TCRBV3S1A0A5B6 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC0.43□□□□□ -2.34
TCRBV3S1A0A5B6 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.43□□□□□ -2.34
TCRBV3S1A0A5B6 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC0.43□□□□□ -2.34
TCRBV3S1A0A5B6 AC130454.1-201ENST00000622948 401 ntBASIC0.43□□□□□ -2.34
TCRBV3S1A0A5B6 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
TCRBV3S1A0A5B6 RNA5SP499-201ENST00000363982 119 ntBASIC0.42□□□□□ -2.34
TCRBV3S1A0A5B6 MIR10B-201ENST00000385011 110 ntBASIC0.42□□□□□ -2.34
TCRBV3S1A0A5B6 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
TCRBV3S1A0A5B6 AL158050.1-201ENST00000416077 457 ntBASIC0.42□□□□□ -2.34
TCRBV3S1A0A5B6 RPL21P111-201ENST00000418453 477 ntBASIC0.42□□□□□ -2.34
TCRBV3S1A0A5B6 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.42□□□□□ -2.34
TCRBV3S1A0A5B6 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC0.42□□□□□ -2.34
TCRBV3S1A0A5B6 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC0.42□□□□□ -2.34
TCRBV3S1A0A5B6 TIMM9P1-201ENST00000436122 256 ntBASIC0.42□□□□□ -2.34
TCRBV3S1A0A5B6 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC0.42□□□□□ -2.34
TCRBV3S1A0A5B6 Z73417.1-201ENST00000447373 778 ntBASIC0.42□□□□□ -2.34
TCRBV3S1A0A5B6 AC132479.1-201ENST00000449160 144 ntBASIC0.42□□□□□ -2.34
TCRBV3S1A0A5B6 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
TCRBV3S1A0A5B6 AC108059.3-201ENST00000456388 214 ntBASIC0.42□□□□□ -2.34
TCRBV3S1A0A5B6 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC0.42□□□□□ -2.34
TCRBV3S1A0A5B6 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.42□□□□□ -2.34
TCRBV3S1A0A5B6 AL163195.1-201ENST00000496941 348 ntBASIC0.42□□□□□ -2.34
TCRBV3S1A0A5B6 AC074344.1-201ENST00000512823 224 ntBASIC0.42□□□□□ -2.34
TCRBV3S1A0A5B6 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC0.42□□□□□ -2.34
TCRBV3S1A0A5B6 AC023632.1-201ENST00000518463 375 ntBASIC0.42□□□□□ -2.34
TCRBV3S1A0A5B6 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0.42□□□□□ -2.34
TCRBV3S1A0A5B6 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC0.42□□□□□ -2.34
TCRBV3S1A0A5B6 AP001189.2-201ENST00000527320 189 ntBASIC0.42□□□□□ -2.34
TCRBV3S1A0A5B6 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
TCRBV3S1A0A5B6 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC0.42□□□□□ -2.34
TCRBV3S1A0A5B6 AC136618.2-201ENST00000575091 400 ntBASIC0.42□□□□□ -2.34
TCRBV3S1A0A5B6 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.42□□□□□ -2.34
TCRBV3S1A0A5B6 MIR3664-201ENST00000579074 99 ntBASIC0.42□□□□□ -2.34
TCRBV3S1A0A5B6 AC126365.2-201ENST00000580630 379 ntBASIC0.42□□□□□ -2.34
TCRBV3S1A0A5B6 AP001981.2-201ENST00000603241 418 ntBASIC0.42□□□□□ -2.34
TCRBV3S1A0A5B6 AC016727.1-205ENST00000605437 569 ntBASIC0.42□□□□□ -2.34
TCRBV3S1A0A5B6 AL365434.2-201ENST00000607979 234 ntBASIC0.42□□□□□ -2.34
TCRBV3S1A0A5B6 AC243773.3-201ENST00000613270 256 ntBASIC0.42□□□□□ -2.34
TCRBV3S1A0A5B6 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.42□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms