Protein–RNA interactions for Protein: A0A0B4J280

TRAV40, T-cell receptor alpha variable 40 (Fragment), humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40A0A0B4J280 AL161651.1-201ENST00000440882 223 ntBASIC1.65□□□□□ -2.15
TRAV40A0A0B4J280 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.65□□□□□ -2.15
TRAV40A0A0B4J280 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.65□□□□□ -2.15
TRAV40A0A0B4J280 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC1.65□□□□□ -2.15
TRAV40A0A0B4J280 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.65□□□□□ -2.15
TRAV40A0A0B4J280 MTATP6P7-201ENST00000453315 681 ntBASIC1.65□□□□□ -2.15
TRAV40A0A0B4J280 RPS3AP17-201ENST00000472594 777 ntBASIC1.65□□□□□ -2.15
TRAV40A0A0B4J280 AC090096.1-201ENST00000489168 390 ntBASIC1.65□□□□□ -2.15
TRAV40A0A0B4J280 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC1.65□□□□□ -2.15
TRAV40A0A0B4J280 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.65□□□□□ -2.15
TRAV40A0A0B4J280 AC108078.1-201ENST00000508073 725 ntBASIC1.65□□□□□ -2.15
TRAV40A0A0B4J280 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC1.65□□□□□ -2.15
TRAV40A0A0B4J280 RNU6-548P-201ENST00000517083 115 ntBASIC1.65□□□□□ -2.15
TRAV40A0A0B4J280 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.65□□□□□ -2.15
TRAV40A0A0B4J280 AP003072.2-201ENST00000527756 676 ntBASIC1.65□□□□□ -2.15
TRAV40A0A0B4J280 AC121758.2-201ENST00000553271 193 ntBASIC1.65□□□□□ -2.15
TRAV40A0A0B4J280 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.65□□□□□ -2.15
TRAV40A0A0B4J280 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.65□□□□□ -2.15
TRAV40A0A0B4J280 MTCYBP33-201ENST00000575007 1130 ntBASIC1.65□□□□□ -2.15
TRAV40A0A0B4J280 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.65□□□□□ -2.15
TRAV40A0A0B4J280 AC008121.1-201ENST00000603244 268 ntBASIC1.65□□□□□ -2.15
TRAV40A0A0B4J280 AC174048.1-201ENST00000603389 144 ntBASIC1.65□□□□□ -2.15
TRAV40A0A0B4J280 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC1.65□□□□□ -2.15
TRAV40A0A0B4J280 AC007684.1-201ENST00000609671 477 ntBASIC1.65□□□□□ -2.15
TRAV40A0A0B4J280 AC011939.3-201ENST00000613686 466 ntBASIC1.65□□□□□ -2.15
TRAV40A0A0B4J280 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.65□□□□□ -2.15
TRAV40A0A0B4J280 AL359547.2-201ENST00000615810 418 ntBASIC1.65□□□□□ -2.15
TRAV40A0A0B4J280 AC072046.2-201ENST00000618366 268 ntBASIC1.65□□□□□ -2.15
TRAV40A0A0B4J280 AC138649.3-201ENST00000622154 254 ntBASIC1.65□□□□□ -2.15
TRAV40A0A0B4J280 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
TRAV40A0A0B4J280 AC244517.12-201ENST00000623581 663 ntBASIC1.65□□□□□ -2.15
TRAV40A0A0B4J280 AC138627.2-201ENST00000624202 601 ntBASIC1.65□□□□□ -2.15
TRAV40A0A0B4J280 AP000553.5-201ENST00000641933 54 ntBASIC1.65□□□□□ -2.15
TRAV40A0A0B4J280 AP006437.1-201ENST00000641440 3685 ntBASIC1.65□□□□□ -2.15
TRAV40A0A0B4J280 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
TRAV40A0A0B4J280 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.64□□□□□ -2.15
TRAV40A0A0B4J280 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
TRAV40A0A0B4J280 RNU1-105P-201ENST00000363470 161 ntBASIC1.64□□□□□ -2.15
TRAV40A0A0B4J280 SNORD14B-201ENST00000364533 90 ntBASIC1.64□□□□□ -2.15
TRAV40A0A0B4J280 MIR583-201ENST00000384846 75 ntBASIC1.64□□□□□ -2.15
TRAV40A0A0B4J280 MIR301A-201ENST00000385261 86 ntBASIC1.64□□□□□ -2.15
TRAV40A0A0B4J280 RNU6-1158P-201ENST00000391167 107 ntBASIC1.64□□□□□ -2.15
TRAV40A0A0B4J280 CALM2P3-201ENST00000400429 449 ntBASIC1.64□□□□□ -2.15
TRAV40A0A0B4J280 AC019129.1-201ENST00000403786 261 ntBASIC1.64□□□□□ -2.15
TRAV40A0A0B4J280 FTH1P15-201ENST00000406984 280 ntBASIC1.64□□□□□ -2.15
TRAV40A0A0B4J280 AL663109.1-201ENST00000411498 844 ntBASIC1.64□□□□□ -2.15
TRAV40A0A0B4J280 USP9YP6-201ENST00000413550 854 ntBASIC1.64□□□□□ -2.15
TRAV40A0A0B4J280 CYCSP33-201ENST00000414485 327 ntBASIC1.64□□□□□ -2.15
TRAV40A0A0B4J280 MTATP6P18-201ENST00000417994 673 ntBASIC1.64□□□□□ -2.15
TRAV40A0A0B4J280 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.64□□□□□ -2.15
TRAV40A0A0B4J280 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.64□□□□□ -2.15
TRAV40A0A0B4J280 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.64□□□□□ -2.15
TRAV40A0A0B4J280 MTCYBP5-201ENST00000423752 1135 ntBASIC1.64□□□□□ -2.15
TRAV40A0A0B4J280 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.64□□□□□ -2.15
TRAV40A0A0B4J280 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.64□□□□□ -2.15
TRAV40A0A0B4J280 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.64□□□□□ -2.15
TRAV40A0A0B4J280 AL078601.1-201ENST00000444542 271 ntBASIC1.64□□□□□ -2.15
TRAV40A0A0B4J280 AC104058.1-201ENST00000448028 297 ntBASIC1.64□□□□□ -2.15
TRAV40A0A0B4J280 MTND1P18-201ENST00000448191 573 ntBASIC1.64□□□□□ -2.15
TRAV40A0A0B4J280 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.64□□□□□ -2.15
TRAV40A0A0B4J280 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.64□□□□□ -2.15
TRAV40A0A0B4J280 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.64□□□□□ -2.15
TRAV40A0A0B4J280 RPS15AP34-201ENST00000487776 387 ntBASIC1.64□□□□□ -2.15
TRAV40A0A0B4J280 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.64□□□□□ -2.15
TRAV40A0A0B4J280 BTF3P12-201ENST00000519620 469 ntBASIC1.64□□□□□ -2.15
TRAV40A0A0B4J280 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
TRAV40A0A0B4J280 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
TRAV40A0A0B4J280 AC092325.1-201ENST00000566449 554 ntBASIC1.64□□□□□ -2.15
TRAV40A0A0B4J280 MIR4703-201ENST00000577728 79 ntBASIC1.64□□□□□ -2.15
TRAV40A0A0B4J280 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC1.64□□□□□ -2.15
TRAV40A0A0B4J280 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.64□□□□□ -2.15
TRAV40A0A0B4J280 MIR6134-201ENST00000617606 109 ntBASIC1.64□□□□□ -2.15
TRAV40A0A0B4J280 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC1.64□□□□□ -2.15
TRAV40A0A0B4J280 MIR3199-2-201ENST00000636243 86 ntBASIC1.64□□□□□ -2.15
TRAV40A0A0B4J280 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.64□□□□□ -2.15
TRAV40A0A0B4J280 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.64□□□□□ -2.15
TRAV40A0A0B4J280 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
TRAV40A0A0B4J280 AC004520.1-201ENST00000608362 1413 ntBASIC1.64□□□□□ -2.15
TRAV40A0A0B4J280 AC138915.1-201ENST00000565427 1685 ntBASIC1.64□□□□□ -2.15
TRAV40A0A0B4J280 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.64□□□□□ -2.15
TRAV40A0A0B4J280 AC008669.1-201ENST00000565823 2178 ntBASIC1.64□□□□□ -2.15
TRAV40A0A0B4J280 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
TRAV40A0A0B4J280 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
TRAV40A0A0B4J280 RNU6-1287P-201ENST00000362914 107 ntBASIC1.63□□□□□ -2.15
TRAV40A0A0B4J280 RNU6-461P-201ENST00000364195 107 ntBASIC1.63□□□□□ -2.15
TRAV40A0A0B4J280 RNA5SP139-201ENST00000364340 117 ntBASIC1.63□□□□□ -2.15
TRAV40A0A0B4J280 SNORA68.1-201ENST00000364537 132 ntBASIC1.63□□□□□ -2.15
TRAV40A0A0B4J280 RNU6-1180P-201ENST00000364935 107 ntBASIC1.63□□□□□ -2.15
TRAV40A0A0B4J280 RNU6-715P-201ENST00000365204 103 ntBASIC1.63□□□□□ -2.15
TRAV40A0A0B4J280 RNU4-48P-201ENST00000365559 182 ntBASIC1.63□□□□□ -2.15
TRAV40A0A0B4J280 RNU6-259P-201ENST00000383999 107 ntBASIC1.63□□□□□ -2.15
TRAV40A0A0B4J280 RNU6-1060P-201ENST00000384664 107 ntBASIC1.63□□□□□ -2.15
TRAV40A0A0B4J280 MIR10A-201ENST00000385043 110 ntBASIC1.63□□□□□ -2.15
TRAV40A0A0B4J280 AL513475.1-201ENST00000406602 315 ntBASIC1.63□□□□□ -2.15
TRAV40A0A0B4J280 RNU2-2P-201ENST00000410396 191 ntBASIC1.63□□□□□ -2.15
TRAV40A0A0B4J280 Y_RNA.623-201ENST00000411128 95 ntBASIC1.63□□□□□ -2.15
TRAV40A0A0B4J280 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.63□□□□□ -2.15
TRAV40A0A0B4J280 AL445685.2-201ENST00000422551 342 ntBASIC1.63□□□□□ -2.15
TRAV40A0A0B4J280 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.63□□□□□ -2.15
TRAV40A0A0B4J280 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms