Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.32□□□□□ -2.36
TRAV1-2A0A0B4J238 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC0.32□□□□□ -2.36
TRAV1-2A0A0B4J238 AC093012.1-202ENST00000549403 582 ntBASIC0.32□□□□□ -2.36
TRAV1-2A0A0B4J238 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.32□□□□□ -2.36
TRAV1-2A0A0B4J238 AC012414.2-201ENST00000559474 187 ntBASIC0.32□□□□□ -2.36
TRAV1-2A0A0B4J238 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.32□□□□□ -2.36
TRAV1-2A0A0B4J238 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.32□□□□□ -2.36
TRAV1-2A0A0B4J238 AC105129.3-201ENST00000605455 485 ntBASIC0.32□□□□□ -2.36
TRAV1-2A0A0B4J238 uc_338.15-201ENST00000615470 191 ntBASIC0.32□□□□□ -2.36
TRAV1-2A0A0B4J238 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.32□□□□□ -2.36
TRAV1-2A0A0B4J238 AC009268.2-201ENST00000621925 457 ntBASIC0.32□□□□□ -2.36
TRAV1-2A0A0B4J238 AC093648.1-201ENST00000623546 606 ntBASIC0.32□□□□□ -2.36
TRAV1-2A0A0B4J238 MIR1248-201ENST00000629190 106 ntBASIC0.32□□□□□ -2.36
TRAV1-2A0A0B4J238 PCF11-AS1-201ENST00000602322 1516 ntBASIC0.32□□□□□ -2.36
TRAV1-2A0A0B4J238 RNU1-93P-201ENST00000364704 169 ntBASIC0.31□□□□□ -2.36
TRAV1-2A0A0B4J238 SNORA50A-201ENST00000384225 134 ntBASIC0.31□□□□□ -2.36
TRAV1-2A0A0B4J238 MIR548B-201ENST00000385247 97 ntBASIC0.31□□□□□ -2.36
TRAV1-2A0A0B4J238 MTND1P21-201ENST00000412991 285 ntBASIC0.31□□□□□ -2.36
TRAV1-2A0A0B4J238 AC010099.3-201ENST00000423896 409 ntBASIC0.31□□□□□ -2.36
TRAV1-2A0A0B4J238 SNX2P2-201ENST00000424553 323 ntBASIC0.31□□□□□ -2.36
TRAV1-2A0A0B4J238 CBX3P6-201ENST00000430257 527 ntBASIC0.31□□□□□ -2.36
TRAV1-2A0A0B4J238 GTF2IP3-201ENST00000433887 494 ntBASIC0.31□□□□□ -2.36
TRAV1-2A0A0B4J238 AC234064.1-201ENST00000436312 247 ntBASIC0.31□□□□□ -2.36
TRAV1-2A0A0B4J238 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
TRAV1-2A0A0B4J238 HGF-207ENST00000453018 721 ntTSL 3 BASIC0.31□□□□□ -2.36
TRAV1-2A0A0B4J238 MTND1P9-201ENST00000453775 944 ntBASIC0.31□□□□□ -2.36
TRAV1-2A0A0B4J238 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC0.31□□□□□ -2.36
TRAV1-2A0A0B4J238 MTCO3P42-201ENST00000509488 518 ntBASIC0.31□□□□□ -2.36
TRAV1-2A0A0B4J238 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC0.31□□□□□ -2.36
TRAV1-2A0A0B4J238 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC0.31□□□□□ -2.36
TRAV1-2A0A0B4J238 AC074344.1-201ENST00000512823 224 ntBASIC0.31□□□□□ -2.36
TRAV1-2A0A0B4J238 MTCO3P39-201ENST00000514812 518 ntBASIC0.31□□□□□ -2.36
TRAV1-2A0A0B4J238 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.31□□□□□ -2.36
TRAV1-2A0A0B4J238 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC0.31□□□□□ -2.36
TRAV1-2A0A0B4J238 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.31□□□□□ -2.36
TRAV1-2A0A0B4J238 AL353997.4-201ENST00000586196 166 ntBASIC0.31□□□□□ -2.36
TRAV1-2A0A0B4J238 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC0.31□□□□□ -2.36
TRAV1-2A0A0B4J238 AC022432.1-201ENST00000595739 310 ntBASIC0.31□□□□□ -2.36
TRAV1-2A0A0B4J238 AC009229.3-201ENST00000608056 282 ntBASIC0.31□□□□□ -2.36
TRAV1-2A0A0B4J238 AC018926.1-201ENST00000616335 435 ntBASIC0.31□□□□□ -2.36
TRAV1-2A0A0B4J238 MIR1264-201ENST00000616374 69 ntBASIC0.31□□□□□ -2.36
TRAV1-2A0A0B4J238 U6.99-201ENST00000637524 83 ntBASIC0.31□□□□□ -2.36
TRAV1-2A0A0B4J238 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.3□□□□□ -2.36
TRAV1-2A0A0B4J238 RNU6-1066P-201ENST00000363573 105 ntBASIC0.3□□□□□ -2.36
TRAV1-2A0A0B4J238 RNU6-743P-201ENST00000364151 106 ntBASIC0.3□□□□□ -2.36
TRAV1-2A0A0B4J238 RNU6-512P-201ENST00000364438 103 ntBASIC0.3□□□□□ -2.36
TRAV1-2A0A0B4J238 SNORD114-24-201ENST00000365029 72 ntBASIC0.3□□□□□ -2.36
TRAV1-2A0A0B4J238 RNU6-898P-201ENST00000365627 104 ntBASIC0.3□□□□□ -2.36
TRAV1-2A0A0B4J238 MIR605-201ENST00000385078 83 ntBASIC0.3□□□□□ -2.36
TRAV1-2A0A0B4J238 MIR23A-201ENST00000385245 73 ntBASIC0.3□□□□□ -2.36
TRAV1-2A0A0B4J238 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.3□□□□□ -2.36
TRAV1-2A0A0B4J238 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.3□□□□□ -2.36
TRAV1-2A0A0B4J238 RPS26P5-201ENST00000418544 335 ntBASIC0.3□□□□□ -2.36
TRAV1-2A0A0B4J238 BX119904.4-201ENST00000424402 301 ntBASIC0.3□□□□□ -2.36
TRAV1-2A0A0B4J238 AC244023.1-201ENST00000426884 112 ntBASIC0.3□□□□□ -2.36
TRAV1-2A0A0B4J238 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC0.3□□□□□ -2.36
TRAV1-2A0A0B4J238 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC0.3□□□□□ -2.36
TRAV1-2A0A0B4J238 COX7BP2-201ENST00000437976 242 ntBASIC0.3□□□□□ -2.36
TRAV1-2A0A0B4J238 GTF2IP13-201ENST00000438487 386 ntBASIC0.3□□□□□ -2.36
TRAV1-2A0A0B4J238 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC0.3□□□□□ -2.36
TRAV1-2A0A0B4J238 HSPE1P13-201ENST00000451143 297 ntBASIC0.3□□□□□ -2.36
TRAV1-2A0A0B4J238 OFD1P7Y-201ENST00000454643 1155 ntBASIC0.3□□□□□ -2.36
TRAV1-2A0A0B4J238 HMGN2P9-201ENST00000476875 229 ntBASIC0.3□□□□□ -2.36
TRAV1-2A0A0B4J238 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC0.3□□□□□ -2.36
TRAV1-2A0A0B4J238 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.3□□□□□ -2.36
TRAV1-2A0A0B4J238 AC110760.3-202ENST00000515177 371 ntBASIC0.3□□□□□ -2.36
TRAV1-2A0A0B4J238 RNU6-714P-201ENST00000516963 103 ntBASIC0.3□□□□□ -2.36
TRAV1-2A0A0B4J238 AC103833.1-201ENST00000517442 172 ntBASIC0.3□□□□□ -2.36
TRAV1-2A0A0B4J238 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC0.3□□□□□ -2.36
TRAV1-2A0A0B4J238 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC0.3□□□□□ -2.36
TRAV1-2A0A0B4J238 HSPE1P4-201ENST00000550617 308 ntBASIC0.3□□□□□ -2.36
TRAV1-2A0A0B4J238 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.3□□□□□ -2.36
TRAV1-2A0A0B4J238 MIR5094-201ENST00000578766 85 ntBASIC0.3□□□□□ -2.36
TRAV1-2A0A0B4J238 MIR4666A-201ENST00000580160 79 ntBASIC0.3□□□□□ -2.36
TRAV1-2A0A0B4J238 AF038458.1-201ENST00000588406 262 ntBASIC0.3□□□□□ -2.36
TRAV1-2A0A0B4J238 AC008751.2-201ENST00000597885 980 ntBASIC0.3□□□□□ -2.36
TRAV1-2A0A0B4J238 AC242498.1-201ENST00000604134 111 ntBASIC0.3□□□□□ -2.36
TRAV1-2A0A0B4J238 AL365434.2-201ENST00000607979 234 ntBASIC0.3□□□□□ -2.36
TRAV1-2A0A0B4J238 AC130324.3-201ENST00000614165 542 ntBASIC0.3□□□□□ -2.36
TRAV1-2A0A0B4J238 AC243994.1-201ENST00000618627 109 ntBASIC0.3□□□□□ -2.36
TRAV1-2A0A0B4J238 AC130454.1-201ENST00000622948 401 ntBASIC0.3□□□□□ -2.36
TRAV1-2A0A0B4J238 MIR5087-201ENST00000635826 76 ntBASIC0.3□□□□□ -2.36
TRAV1-2A0A0B4J238 AC132825.7-201ENST00000638744 335 ntBASIC0.3□□□□□ -2.36
TRAV1-2A0A0B4J238 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC0.3□□□□□ -2.36
TRAV1-2A0A0B4J238 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC0.29□□□□□ -2.36
TRAV1-2A0A0B4J238 SNRPEP3-201ENST00000338402 276 ntBASIC0.29□□□□□ -2.36
TRAV1-2A0A0B4J238 MIR520E-201ENST00000384867 87 ntBASIC0.29□□□□□ -2.36
TRAV1-2A0A0B4J238 FTH1P15-201ENST00000406984 280 ntBASIC0.29□□□□□ -2.36
TRAV1-2A0A0B4J238 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC0.29□□□□□ -2.36
TRAV1-2A0A0B4J238 RPL21P111-201ENST00000418453 477 ntBASIC0.29□□□□□ -2.36
TRAV1-2A0A0B4J238 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC0.29□□□□□ -2.36
TRAV1-2A0A0B4J238 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.29□□□□□ -2.36
TRAV1-2A0A0B4J238 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
TRAV1-2A0A0B4J238 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC0.29□□□□□ -2.36
TRAV1-2A0A0B4J238 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC0.29□□□□□ -2.36
TRAV1-2A0A0B4J238 snoU13.8-201ENST00000458890 104 ntBASIC0.29□□□□□ -2.36
TRAV1-2A0A0B4J238 RNU7-140P-201ENST00000459546 60 ntBASIC0.29□□□□□ -2.36
TRAV1-2A0A0B4J238 SNORD124-201ENST00000459577 104 ntBASIC0.29□□□□□ -2.36
TRAV1-2A0A0B4J238 BET1P1-201ENST00000482276 359 ntBASIC0.29□□□□□ -2.36
TRAV1-2A0A0B4J238 COX6CP6-201ENST00000490840 228 ntBASIC0.29□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms