Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 RAC1P6-201ENST00000423911 575 ntBASIC0.73□□□□□ -2.29
TRAV27A0A087WT01 MTCYBP40-201ENST00000509390 1135 ntBASIC0.73□□□□□ -2.29
TRAV27A0A087WT01 RNU6-351P-201ENST00000516097 100 ntBASIC0.73□□□□□ -2.29
TRAV27A0A087WT01 RN7SKP265-201ENST00000516448 223 ntBASIC0.73□□□□□ -2.29
TRAV27A0A087WT01 RNU6-143P-201ENST00000516942 93 ntBASIC0.73□□□□□ -2.29
TRAV27A0A087WT01 RNA5SP404-201ENST00000517118 132 ntBASIC0.73□□□□□ -2.29
TRAV27A0A087WT01 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC0.73□□□□□ -2.29
TRAV27A0A087WT01 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC0.73□□□□□ -2.29
TRAV27A0A087WT01 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC0.73□□□□□ -2.29
TRAV27A0A087WT01 AC021451.1-201ENST00000523498 1129 ntBASIC0.73□□□□□ -2.29
TRAV27A0A087WT01 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC0.73□□□□□ -2.29
TRAV27A0A087WT01 AL356057.1-201ENST00000533798 831 ntBASIC0.73□□□□□ -2.29
TRAV27A0A087WT01 AC018630.3-201ENST00000542637 96 ntBASIC0.73□□□□□ -2.29
TRAV27A0A087WT01 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC0.73□□□□□ -2.29
TRAV27A0A087WT01 MTCYBP33-201ENST00000575007 1130 ntBASIC0.73□□□□□ -2.29
TRAV27A0A087WT01 MIR3169-201ENST00000578032 83 ntBASIC0.73□□□□□ -2.29
TRAV27A0A087WT01 AC126365.2-201ENST00000580630 379 ntBASIC0.73□□□□□ -2.29
TRAV27A0A087WT01 AP001981.2-201ENST00000603241 418 ntBASIC0.73□□□□□ -2.29
TRAV27A0A087WT01 AC069545.1-201ENST00000605671 358 ntBASIC0.73□□□□□ -2.29
TRAV27A0A087WT01 AC004492.1-201ENST00000607036 742 ntBASIC0.73□□□□□ -2.29
TRAV27A0A087WT01 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC0.73□□□□□ -2.29
TRAV27A0A087WT01 AL590240.4-201ENST00000616908 390 ntBASIC0.73□□□□□ -2.29
TRAV27A0A087WT01 AC012676.2-201ENST00000619258 186 ntBASIC0.73□□□□□ -2.29
TRAV27A0A087WT01 AP000676.3-201ENST00000623299 569 ntBASIC0.73□□□□□ -2.29
TRAV27A0A087WT01 AC093648.1-201ENST00000623546 606 ntBASIC0.73□□□□□ -2.29
TRAV27A0A087WT01 AP003485.1-201ENST00000625093 753 ntBASIC0.73□□□□□ -2.29
TRAV27A0A087WT01 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.72□□□□□ -2.29
TRAV27A0A087WT01 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
TRAV27A0A087WT01 Y_RNA.40-201ENST00000362645 93 ntBASIC0.72□□□□□ -2.29
TRAV27A0A087WT01 RNU6-853P-201ENST00000364306 107 ntBASIC0.72□□□□□ -2.29
TRAV27A0A087WT01 RNU6-26P-201ENST00000383985 107 ntBASIC0.72□□□□□ -2.29
TRAV27A0A087WT01 RNU6-14P-201ENST00000384630 106 ntBASIC0.72□□□□□ -2.29
TRAV27A0A087WT01 UBE2V1P10-201ENST00000414685 269 ntBASIC0.72□□□□□ -2.29
TRAV27A0A087WT01 RPS15AP12-201ENST00000419498 388 ntBASIC0.72□□□□□ -2.29
TRAV27A0A087WT01 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC0.72□□□□□ -2.29
TRAV27A0A087WT01 MRPS36P1-201ENST00000421291 307 ntBASIC0.72□□□□□ -2.29
TRAV27A0A087WT01 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC0.72□□□□□ -2.29
TRAV27A0A087WT01 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC0.72□□□□□ -2.29
TRAV27A0A087WT01 MTND4P25-201ENST00000441039 533 ntBASIC0.72□□□□□ -2.29
TRAV27A0A087WT01 MTND2P4-201ENST00000445034 1004 ntBASIC0.72□□□□□ -2.29
TRAV27A0A087WT01 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.72□□□□□ -2.29
TRAV27A0A087WT01 RPL30P6-201ENST00000475925 342 ntBASIC0.72□□□□□ -2.29
TRAV27A0A087WT01 HMGN1P7-201ENST00000491722 313 ntBASIC0.72□□□□□ -2.29
TRAV27A0A087WT01 AC103851.1-201ENST00000506833 274 ntBASIC0.72□□□□□ -2.29
TRAV27A0A087WT01 UBL5P1-201ENST00000507979 193 ntBASIC0.72□□□□□ -2.29
TRAV27A0A087WT01 AC024589.1-201ENST00000512207 263 ntBASIC0.72□□□□□ -2.29
TRAV27A0A087WT01 AC008837.2-201ENST00000513076 418 ntBASIC0.72□□□□□ -2.29
TRAV27A0A087WT01 SNORA31.16-201ENST00000516773 139 ntBASIC0.72□□□□□ -2.29
TRAV27A0A087WT01 RNU6-64P-201ENST00000517119 105 ntBASIC0.72□□□□□ -2.29
TRAV27A0A087WT01 RN7SKP256-201ENST00000517201 314 ntBASIC0.72□□□□□ -2.29
TRAV27A0A087WT01 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC0.72□□□□□ -2.29
TRAV27A0A087WT01 AP006587.4-201ENST00000526053 529 ntBASIC0.72□□□□□ -2.29
TRAV27A0A087WT01 TRAV32-201ENST00000553993 340 ntBASIC0.72□□□□□ -2.29
TRAV27A0A087WT01 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC0.72□□□□□ -2.29
TRAV27A0A087WT01 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC0.72□□□□□ -2.29
TRAV27A0A087WT01 BNIP3P9-201ENST00000603714 553 ntBASIC0.72□□□□□ -2.29
TRAV27A0A087WT01 MIR6857-201ENST00000613267 93 ntBASIC0.72□□□□□ -2.29
TRAV27A0A087WT01 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC0.72□□□□□ -2.29
TRAV27A0A087WT01 AC078880.5-201ENST00000617845 421 ntBASIC0.72□□□□□ -2.29
TRAV27A0A087WT01 MIR1248-201ENST00000629190 106 ntBASIC0.72□□□□□ -2.29
TRAV27A0A087WT01 AC008993.2-201ENST00000631744 806 ntBASIC0.72□□□□□ -2.29
TRAV27A0A087WT01 AL512643.1-201ENST00000635735 524 ntBASIC0.72□□□□□ -2.29
TRAV27A0A087WT01 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.72□□□□□ -2.29
TRAV27A0A087WT01 AC245060.5-201ENST00000610778 3293 ntBASIC0.71□□□□□ -2.3
TRAV27A0A087WT01 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.71□□□□□ -2.3
TRAV27A0A087WT01 RNU6-112P-201ENST00000363599 104 ntBASIC0.71□□□□□ -2.3
TRAV27A0A087WT01 RNU6-166P-201ENST00000384371 107 ntBASIC0.71□□□□□ -2.3
TRAV27A0A087WT01 RNU6-160P-201ENST00000384591 107 ntBASIC0.71□□□□□ -2.3
TRAV27A0A087WT01 MIR19A-201ENST00000384878 82 ntBASIC0.71□□□□□ -2.3
TRAV27A0A087WT01 SNORA40C-201ENST00000391285 128 ntBASIC0.71□□□□□ -2.3
TRAV27A0A087WT01 AC119751.3-201ENST00000399720 670 ntBASIC0.71□□□□□ -2.3
TRAV27A0A087WT01 AL603865.2-201ENST00000401679 213 ntBASIC0.71□□□□□ -2.3
TRAV27A0A087WT01 AC016831.2-201ENST00000417179 352 ntBASIC0.71□□□□□ -2.3
TRAV27A0A087WT01 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.71□□□□□ -2.3
TRAV27A0A087WT01 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.71□□□□□ -2.3
TRAV27A0A087WT01 Z73417.1-201ENST00000447373 778 ntBASIC0.71□□□□□ -2.3
TRAV27A0A087WT01 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC0.71□□□□□ -2.3
TRAV27A0A087WT01 AC012308.1-201ENST00000451232 178 ntBASIC0.71□□□□□ -2.3
TRAV27A0A087WT01 AC130509.1-201ENST00000464158 433 ntBASIC0.71□□□□□ -2.3
TRAV27A0A087WT01 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.71□□□□□ -2.3
TRAV27A0A087WT01 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC0.71□□□□□ -2.3
TRAV27A0A087WT01 AC005840.1-201ENST00000498412 377 ntBASIC0.71□□□□□ -2.3
TRAV27A0A087WT01 HMGN1P13-201ENST00000505795 138 ntBASIC0.71□□□□□ -2.3
TRAV27A0A087WT01 AC079140.2-201ENST00000506193 142 ntBASIC0.71□□□□□ -2.3
TRAV27A0A087WT01 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.71□□□□□ -2.3
TRAV27A0A087WT01 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC0.71□□□□□ -2.3
TRAV27A0A087WT01 CENPUP1-201ENST00000526649 1202 ntBASIC0.71□□□□□ -2.3
TRAV27A0A087WT01 DEFB131D-201ENST00000526803 184 ntBASIC0.71□□□□□ -2.3
TRAV27A0A087WT01 AL731537.2-201ENST00000561565 951 ntBASIC0.71□□□□□ -2.3
TRAV27A0A087WT01 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.71□□□□□ -2.3
TRAV27A0A087WT01 MIR4293-201ENST00000584305 78 ntBASIC0.71□□□□□ -2.3
TRAV27A0A087WT01 VN1R87P-201ENST00000596706 487 ntBASIC0.71□□□□□ -2.3
TRAV27A0A087WT01 AC078795.2-201ENST00000602835 1252 ntBASIC0.71□□□□□ -2.3
TRAV27A0A087WT01 RPL21P136-201ENST00000605378 396 ntBASIC0.71□□□□□ -2.3
TRAV27A0A087WT01 AC023158.2-201ENST00000614876 543 ntBASIC0.71□□□□□ -2.3
TRAV27A0A087WT01 AC018926.1-201ENST00000616335 435 ntBASIC0.71□□□□□ -2.3
TRAV27A0A087WT01 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.71□□□□□ -2.3
TRAV27A0A087WT01 AC130454.1-201ENST00000622948 401 ntBASIC0.71□□□□□ -2.3
TRAV27A0A087WT01 AC068205.3-201ENST00000636385 468 ntBASIC0.71□□□□□ -2.3
TRAV27A0A087WT01 RNU6-701P-201ENST00000384059 107 ntBASIC0.7□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms