Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chmp2aQ9DB34 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chmp2aQ9DB34 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Chmp2aQ9DB34 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chmp2aQ9DB34 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Chmp2aQ9DB34 Gm27742-201ENSMUST00000184667 60 ntBASIC16.87■□□□□ 0.29
Chmp2aQ9DB34 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Chmp2aQ9DB34 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chmp2aQ9DB34 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chmp2aQ9DB34 Gm10819-201ENSMUST00000099988 561 ntBASIC16.87■□□□□ 0.29
Chmp2aQ9DB34 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Chmp2aQ9DB34 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chmp2aQ9DB34 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Chmp2aQ9DB34 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chmp2aQ9DB34 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Chmp2aQ9DB34 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chmp2aQ9DB34 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Chmp2aQ9DB34 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chmp2aQ9DB34 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Chmp2aQ9DB34 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp2aQ9DB34 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp2aQ9DB34 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp2aQ9DB34 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp2aQ9DB34 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp2aQ9DB34 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp2aQ9DB34 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp2aQ9DB34 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
Chmp2aQ9DB34 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp2aQ9DB34 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.86■□□□□ 0.29
Chmp2aQ9DB34 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC16.86■□□□□ 0.29
Chmp2aQ9DB34 Gm15794-201ENSMUST00000120182 631 ntBASIC16.86■□□□□ 0.29
Chmp2aQ9DB34 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp2aQ9DB34 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Chmp2aQ9DB34 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp2aQ9DB34 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Chmp2aQ9DB34 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Chmp2aQ9DB34 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Chmp2aQ9DB34 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp2aQ9DB34 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp2aQ9DB34 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp2aQ9DB34 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.86■□□□□ 0.29
Chmp2aQ9DB34 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp2aQ9DB34 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Chmp2aQ9DB34 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp2aQ9DB34 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp2aQ9DB34 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp2aQ9DB34 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Chmp2aQ9DB34 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp2aQ9DB34 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp2aQ9DB34 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp2aQ9DB34 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp2aQ9DB34 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp2aQ9DB34 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp2aQ9DB34 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp2aQ9DB34 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp2aQ9DB34 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp2aQ9DB34 Olfr129-201ENSMUST00000122318 993 ntBASIC16.85■□□□□ 0.29
Chmp2aQ9DB34 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
Chmp2aQ9DB34 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.85■□□□□ 0.29
Chmp2aQ9DB34 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp2aQ9DB34 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp2aQ9DB34 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp2aQ9DB34 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp2aQ9DB34 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp2aQ9DB34 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp2aQ9DB34 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Chmp2aQ9DB34 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp2aQ9DB34 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp2aQ9DB34 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp2aQ9DB34 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.85■□□□□ 0.29
Chmp2aQ9DB34 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp2aQ9DB34 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp2aQ9DB34 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp2aQ9DB34 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Chmp2aQ9DB34 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp2aQ9DB34 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp2aQ9DB34 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Chmp2aQ9DB34 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp2aQ9DB34 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp2aQ9DB34 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp2aQ9DB34 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp2aQ9DB34 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
Chmp2aQ9DB34 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.84■□□□□ 0.29
Chmp2aQ9DB34 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp2aQ9DB34 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp2aQ9DB34 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp2aQ9DB34 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp2aQ9DB34 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp2aQ9DB34 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.84■□□□□ 0.29
Chmp2aQ9DB34 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp2aQ9DB34 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp2aQ9DB34 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.84■□□□□ 0.29
Chmp2aQ9DB34 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Chmp2aQ9DB34 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Chmp2aQ9DB34 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Chmp2aQ9DB34 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Chmp2aQ9DB34 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Chmp2aQ9DB34 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Chmp2aQ9DB34 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.29
Chmp2aQ9DB34 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms