Protein–RNA interactions for Protein: Q9D2N9

Vps33a, Vacuolar protein sorting-associated protein 33A, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33aQ9D2N9 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Vps33aQ9D2N9 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps33aQ9D2N9 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC17.19■□□□□ 0.34
Vps33aQ9D2N9 Gm44291-201ENSMUST00000203102 2865 ntBASIC17.19■□□□□ 0.34
Vps33aQ9D2N9 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps33aQ9D2N9 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps33aQ9D2N9 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Vps33aQ9D2N9 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Vps33aQ9D2N9 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Vps33aQ9D2N9 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Vps33aQ9D2N9 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps33aQ9D2N9 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps33aQ9D2N9 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps33aQ9D2N9 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC17.18■□□□□ 0.34
Vps33aQ9D2N9 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC17.18■□□□□ 0.34
Vps33aQ9D2N9 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps33aQ9D2N9 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps33aQ9D2N9 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps33aQ9D2N9 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps33aQ9D2N9 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.18■□□□□ 0.34
Vps33aQ9D2N9 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps33aQ9D2N9 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps33aQ9D2N9 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Vps33aQ9D2N9 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.18■□□□□ 0.34
Vps33aQ9D2N9 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Vps33aQ9D2N9 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.18■□□□□ 0.34
Vps33aQ9D2N9 Gm44549-201ENSMUST00000208351 577 ntBASIC17.18■□□□□ 0.34
Vps33aQ9D2N9 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps33aQ9D2N9 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps33aQ9D2N9 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps33aQ9D2N9 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps33aQ9D2N9 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.18■□□□□ 0.34
Vps33aQ9D2N9 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Vps33aQ9D2N9 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps33aQ9D2N9 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Vps33aQ9D2N9 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Vps33aQ9D2N9 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Vps33aQ9D2N9 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps33aQ9D2N9 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps33aQ9D2N9 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps33aQ9D2N9 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vps33aQ9D2N9 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vps33aQ9D2N9 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Vps33aQ9D2N9 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Vps33aQ9D2N9 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Vps33aQ9D2N9 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Vps33aQ9D2N9 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Vps33aQ9D2N9 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vps33aQ9D2N9 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Vps33aQ9D2N9 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vps33aQ9D2N9 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vps33aQ9D2N9 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vps33aQ9D2N9 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vps33aQ9D2N9 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vps33aQ9D2N9 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Vps33aQ9D2N9 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vps33aQ9D2N9 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vps33aQ9D2N9 Gm11927-201ENSMUST00000118472 759 ntBASIC17.17■□□□□ 0.34
Vps33aQ9D2N9 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vps33aQ9D2N9 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.17■□□□□ 0.34
Vps33aQ9D2N9 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Vps33aQ9D2N9 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vps33aQ9D2N9 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vps33aQ9D2N9 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Vps33aQ9D2N9 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vps33aQ9D2N9 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vps33aQ9D2N9 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Vps33aQ9D2N9 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Vps33aQ9D2N9 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vps33aQ9D2N9 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vps33aQ9D2N9 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps33aQ9D2N9 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
Vps33aQ9D2N9 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Vps33aQ9D2N9 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps33aQ9D2N9 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps33aQ9D2N9 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC17.16■□□□□ 0.34
Vps33aQ9D2N9 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps33aQ9D2N9 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Vps33aQ9D2N9 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps33aQ9D2N9 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Vps33aQ9D2N9 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps33aQ9D2N9 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps33aQ9D2N9 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
Vps33aQ9D2N9 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Vps33aQ9D2N9 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Vps33aQ9D2N9 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Vps33aQ9D2N9 Mtag2-201ENSMUST00000058665 714 ntBASIC17.16■□□□□ 0.34
Vps33aQ9D2N9 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC17.16■□□□□ 0.34
Vps33aQ9D2N9 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC17.16■□□□□ 0.34
Vps33aQ9D2N9 Sorbs3-204ENSMUST00000227929 2460 ntBASIC17.16■□□□□ 0.34
Vps33aQ9D2N9 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps33aQ9D2N9 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps33aQ9D2N9 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
Vps33aQ9D2N9 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Vps33aQ9D2N9 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC17.16■□□□□ 0.34
Vps33aQ9D2N9 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vps33aQ9D2N9 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vps33aQ9D2N9 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vps33aQ9D2N9 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vps33aQ9D2N9 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms