Protein–RNA interactions for Protein: Q9CZQ6

Raet1e, Retinoic acid early-inducible protein 1-epsilon, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1eQ9CZQ6 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Raet1eQ9CZQ6 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Raet1eQ9CZQ6 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Raet1eQ9CZQ6 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
Raet1eQ9CZQ6 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC14.24□□□□□ -0.13
Raet1eQ9CZQ6 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Raet1eQ9CZQ6 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Raet1eQ9CZQ6 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Raet1eQ9CZQ6 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Raet1eQ9CZQ6 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Raet1eQ9CZQ6 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Raet1eQ9CZQ6 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Raet1eQ9CZQ6 AC120002.2-201ENSMUST00000220205 773 ntBASIC14.24□□□□□ -0.13
Raet1eQ9CZQ6 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Raet1eQ9CZQ6 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Raet1eQ9CZQ6 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Raet1eQ9CZQ6 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
Raet1eQ9CZQ6 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Raet1eQ9CZQ6 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Raet1eQ9CZQ6 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Raet1eQ9CZQ6 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Raet1eQ9CZQ6 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Raet1eQ9CZQ6 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Raet1eQ9CZQ6 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Raet1eQ9CZQ6 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Raet1eQ9CZQ6 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Raet1eQ9CZQ6 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.23□□□□□ -0.13
Raet1eQ9CZQ6 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Raet1eQ9CZQ6 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.23□□□□□ -0.13
Raet1eQ9CZQ6 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Raet1eQ9CZQ6 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Raet1eQ9CZQ6 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC14.23□□□□□ -0.13
Raet1eQ9CZQ6 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Raet1eQ9CZQ6 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Raet1eQ9CZQ6 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Raet1eQ9CZQ6 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC14.23□□□□□ -0.13
Raet1eQ9CZQ6 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Raet1eQ9CZQ6 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Raet1eQ9CZQ6 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Raet1eQ9CZQ6 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Raet1eQ9CZQ6 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC14.23□□□□□ -0.13
Raet1eQ9CZQ6 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC14.23□□□□□ -0.13
Raet1eQ9CZQ6 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Raet1eQ9CZQ6 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC14.23□□□□□ -0.13
Raet1eQ9CZQ6 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC14.23□□□□□ -0.13
Raet1eQ9CZQ6 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Raet1eQ9CZQ6 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Raet1eQ9CZQ6 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Raet1eQ9CZQ6 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Raet1eQ9CZQ6 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Raet1eQ9CZQ6 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Raet1eQ9CZQ6 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Raet1eQ9CZQ6 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Raet1eQ9CZQ6 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Raet1eQ9CZQ6 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Raet1eQ9CZQ6 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Raet1eQ9CZQ6 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Raet1eQ9CZQ6 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC14.23□□□□□ -0.13
Raet1eQ9CZQ6 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Raet1eQ9CZQ6 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Raet1eQ9CZQ6 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Raet1eQ9CZQ6 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Raet1eQ9CZQ6 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Raet1eQ9CZQ6 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Raet1eQ9CZQ6 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Raet1eQ9CZQ6 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Raet1eQ9CZQ6 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.22□□□□□ -0.13
Raet1eQ9CZQ6 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Raet1eQ9CZQ6 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Raet1eQ9CZQ6 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Raet1eQ9CZQ6 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Raet1eQ9CZQ6 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Raet1eQ9CZQ6 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Raet1eQ9CZQ6 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Raet1eQ9CZQ6 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Raet1eQ9CZQ6 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.22□□□□□ -0.13
Raet1eQ9CZQ6 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Raet1eQ9CZQ6 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Raet1eQ9CZQ6 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Raet1eQ9CZQ6 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Raet1eQ9CZQ6 Gm12896-201ENSMUST00000118430 226 ntBASIC14.22□□□□□ -0.13
Raet1eQ9CZQ6 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Raet1eQ9CZQ6 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC14.22□□□□□ -0.13
Raet1eQ9CZQ6 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC14.22□□□□□ -0.13
Raet1eQ9CZQ6 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Raet1eQ9CZQ6 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC14.22□□□□□ -0.13
Raet1eQ9CZQ6 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Raet1eQ9CZQ6 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Raet1eQ9CZQ6 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Raet1eQ9CZQ6 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC14.22□□□□□ -0.13
Raet1eQ9CZQ6 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Raet1eQ9CZQ6 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Raet1eQ9CZQ6 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Raet1eQ9CZQ6 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Raet1eQ9CZQ6 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Raet1eQ9CZQ6 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Raet1eQ9CZQ6 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Raet1eQ9CZQ6 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Raet1eQ9CZQ6 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Raet1eQ9CZQ6 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms