Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Gm18101-201ENSMUST00000215769 548 ntBASIC15.83■□□□□ 0.12
Trim16Q99PP9 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim16Q99PP9 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim16Q99PP9 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim16Q99PP9 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC15.83■□□□□ 0.12
Trim16Q99PP9 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim16Q99PP9 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim16Q99PP9 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Trim16Q99PP9 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim16Q99PP9 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim16Q99PP9 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim16Q99PP9 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim16Q99PP9 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trim16Q99PP9 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim16Q99PP9 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Trim16Q99PP9 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Trim16Q99PP9 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim16Q99PP9 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim16Q99PP9 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Trim16Q99PP9 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim16Q99PP9 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim16Q99PP9 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim16Q99PP9 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.82■□□□□ 0.12
Trim16Q99PP9 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Trim16Q99PP9 Gm13186-201ENSMUST00000118031 316 ntBASIC15.82■□□□□ 0.12
Trim16Q99PP9 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim16Q99PP9 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim16Q99PP9 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim16Q99PP9 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim16Q99PP9 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trim16Q99PP9 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim16Q99PP9 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trim16Q99PP9 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim16Q99PP9 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim16Q99PP9 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim16Q99PP9 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim16Q99PP9 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trim16Q99PP9 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim16Q99PP9 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim16Q99PP9 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trim16Q99PP9 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.81■□□□□ 0.12
Trim16Q99PP9 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trim16Q99PP9 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim16Q99PP9 Gm10013-201ENSMUST00000106074 672 ntBASIC15.81■□□□□ 0.12
Trim16Q99PP9 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim16Q99PP9 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim16Q99PP9 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC15.81■□□□□ 0.12
Trim16Q99PP9 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Trim16Q99PP9 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim16Q99PP9 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trim16Q99PP9 Gm21559-201ENSMUST00000220638 855 ntBASIC15.81■□□□□ 0.12
Trim16Q99PP9 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.81■□□□□ 0.12
Trim16Q99PP9 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim16Q99PP9 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim16Q99PP9 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim16Q99PP9 Gm8587-201ENSMUST00000076538 843 ntBASIC15.81■□□□□ 0.12
Trim16Q99PP9 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim16Q99PP9 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim16Q99PP9 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim16Q99PP9 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim16Q99PP9 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim16Q99PP9 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim16Q99PP9 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim16Q99PP9 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim16Q99PP9 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim16Q99PP9 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trim16Q99PP9 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim16Q99PP9 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim16Q99PP9 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trim16Q99PP9 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Trim16Q99PP9 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Trim16Q99PP9 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC15.8■□□□□ 0.12
Trim16Q99PP9 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim16Q99PP9 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim16Q99PP9 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim16Q99PP9 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trim16Q99PP9 Gm26039-201ENSMUST00000158152 144 ntBASIC15.8■□□□□ 0.12
Trim16Q99PP9 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC15.8■□□□□ 0.12
Trim16Q99PP9 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Trim16Q99PP9 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim16Q99PP9 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim16Q99PP9 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.8■□□□□ 0.12
Trim16Q99PP9 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim16Q99PP9 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim16Q99PP9 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trim16Q99PP9 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim16Q99PP9 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim16Q99PP9 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim16Q99PP9 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim16Q99PP9 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim16Q99PP9 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim16Q99PP9 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Trim16Q99PP9 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim16Q99PP9 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trim16Q99PP9 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim16Q99PP9 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trim16Q99PP9 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim16Q99PP9 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Trim16Q99PP9 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC15.79■□□□□ 0.12
Trim16Q99PP9 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms