Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cstf1Q99LC2 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cstf1Q99LC2 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Cstf1Q99LC2 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cstf1Q99LC2 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cstf1Q99LC2 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cstf1Q99LC2 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cstf1Q99LC2 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cstf1Q99LC2 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.12■□□□□ 0.17
Cstf1Q99LC2 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cstf1Q99LC2 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cstf1Q99LC2 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cstf1Q99LC2 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.12■□□□□ 0.17
Cstf1Q99LC2 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
Cstf1Q99LC2 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cstf1Q99LC2 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cstf1Q99LC2 Gm7507-201ENSMUST00000183053 1008 ntBASIC16.12■□□□□ 0.17
Cstf1Q99LC2 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC16.12■□□□□ 0.17
Cstf1Q99LC2 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cstf1Q99LC2 Gm8655-201ENSMUST00000221159 852 ntBASIC16.12■□□□□ 0.17
Cstf1Q99LC2 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cstf1Q99LC2 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cstf1Q99LC2 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cstf1Q99LC2 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Cstf1Q99LC2 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cstf1Q99LC2 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cstf1Q99LC2 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.11■□□□□ 0.17
Cstf1Q99LC2 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cstf1Q99LC2 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cstf1Q99LC2 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cstf1Q99LC2 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cstf1Q99LC2 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC16.11■□□□□ 0.17
Cstf1Q99LC2 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC16.11■□□□□ 0.17
Cstf1Q99LC2 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cstf1Q99LC2 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC16.11■□□□□ 0.17
Cstf1Q99LC2 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC16.11■□□□□ 0.17
Cstf1Q99LC2 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC16.11■□□□□ 0.17
Cstf1Q99LC2 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC16.11■□□□□ 0.17
Cstf1Q99LC2 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC16.11■□□□□ 0.17
Cstf1Q99LC2 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Cstf1Q99LC2 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cstf1Q99LC2 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cstf1Q99LC2 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cstf1Q99LC2 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cstf1Q99LC2 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cstf1Q99LC2 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cstf1Q99LC2 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cstf1Q99LC2 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cstf1Q99LC2 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cstf1Q99LC2 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cstf1Q99LC2 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cstf1Q99LC2 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cstf1Q99LC2 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
Cstf1Q99LC2 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.11■□□□□ 0.17
Cstf1Q99LC2 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cstf1Q99LC2 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cstf1Q99LC2 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cstf1Q99LC2 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cstf1Q99LC2 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cstf1Q99LC2 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cstf1Q99LC2 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cstf1Q99LC2 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cstf1Q99LC2 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cstf1Q99LC2 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.1■□□□□ 0.17
Cstf1Q99LC2 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Cstf1Q99LC2 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cstf1Q99LC2 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cstf1Q99LC2 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.1■□□□□ 0.17
Cstf1Q99LC2 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cstf1Q99LC2 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC16.1■□□□□ 0.17
Cstf1Q99LC2 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cstf1Q99LC2 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cstf1Q99LC2 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC16.1■□□□□ 0.17
Cstf1Q99LC2 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC16.1■□□□□ 0.17
Cstf1Q99LC2 Gm5186-201ENSMUST00000218781 920 ntBASIC16.1■□□□□ 0.17
Cstf1Q99LC2 AC158982.1-201ENSMUST00000228377 901 ntBASIC16.1■□□□□ 0.17
Cstf1Q99LC2 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cstf1Q99LC2 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cstf1Q99LC2 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cstf1Q99LC2 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cstf1Q99LC2 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cstf1Q99LC2 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.1■□□□□ 0.17
Cstf1Q99LC2 Gm3928-201ENSMUST00000121141 1307 ntBASIC16.1■□□□□ 0.17
Cstf1Q99LC2 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cstf1Q99LC2 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.1■□□□□ 0.17
Cstf1Q99LC2 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cstf1Q99LC2 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cstf1Q99LC2 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cstf1Q99LC2 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Cstf1Q99LC2 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Cstf1Q99LC2 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cstf1Q99LC2 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Cstf1Q99LC2 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cstf1Q99LC2 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cstf1Q99LC2 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cstf1Q99LC2 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.09■□□□□ 0.17
Cstf1Q99LC2 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cstf1Q99LC2 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.09■□□□□ 0.17
Cstf1Q99LC2 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cstf1Q99LC2 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms