Protein–RNA interactions for Protein: Q91Y10

Pcdhac1, Protocadherin alpha C1, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1Q91Y10 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhac1Q91Y10 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhac1Q91Y10 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhac1Q91Y10 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhac1Q91Y10 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhac1Q91Y10 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Pcdhac1Q91Y10 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC15.16■□□□□ 0.02
Pcdhac1Q91Y10 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhac1Q91Y10 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhac1Q91Y10 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Pcdhac1Q91Y10 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhac1Q91Y10 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhac1Q91Y10 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhac1Q91Y10 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhac1Q91Y10 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhac1Q91Y10 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhac1Q91Y10 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhac1Q91Y10 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhac1Q91Y10 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhac1Q91Y10 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhac1Q91Y10 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhac1Q91Y10 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC15.15■□□□□ 0.02
Pcdhac1Q91Y10 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC15.15■□□□□ 0.02
Pcdhac1Q91Y10 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhac1Q91Y10 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhac1Q91Y10 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Pcdhac1Q91Y10 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhac1Q91Y10 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhac1Q91Y10 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhac1Q91Y10 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhac1Q91Y10 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Pcdhac1Q91Y10 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhac1Q91Y10 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhac1Q91Y10 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhac1Q91Y10 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhac1Q91Y10 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhac1Q91Y10 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhac1Q91Y10 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhac1Q91Y10 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhac1Q91Y10 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhac1Q91Y10 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhac1Q91Y10 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhac1Q91Y10 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhac1Q91Y10 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Pcdhac1Q91Y10 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhac1Q91Y10 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC15.14■□□□□ 0.01
Pcdhac1Q91Y10 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Pcdhac1Q91Y10 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC15.14■□□□□ 0.01
Pcdhac1Q91Y10 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhac1Q91Y10 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC15.14■□□□□ 0.01
Pcdhac1Q91Y10 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhac1Q91Y10 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Pcdhac1Q91Y10 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhac1Q91Y10 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhac1Q91Y10 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhac1Q91Y10 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhac1Q91Y10 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhac1Q91Y10 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhac1Q91Y10 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhac1Q91Y10 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhac1Q91Y10 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Pcdhac1Q91Y10 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhac1Q91Y10 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhac1Q91Y10 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhac1Q91Y10 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhac1Q91Y10 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhac1Q91Y10 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhac1Q91Y10 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhac1Q91Y10 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhac1Q91Y10 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhac1Q91Y10 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC15.13■□□□□ 0.01
Pcdhac1Q91Y10 Mir7071-201ENSMUST00000184847 69 ntBASIC15.13■□□□□ 0.01
Pcdhac1Q91Y10 Gm45058-201ENSMUST00000205810 766 ntBASIC15.13■□□□□ 0.01
Pcdhac1Q91Y10 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhac1Q91Y10 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Pcdhac1Q91Y10 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhac1Q91Y10 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhac1Q91Y10 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Pcdhac1Q91Y10 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhac1Q91Y10 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhac1Q91Y10 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhac1Q91Y10 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhac1Q91Y10 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhac1Q91Y10 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhac1Q91Y10 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.13■□□□□ 0.01
Pcdhac1Q91Y10 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhac1Q91Y10 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhac1Q91Y10 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhac1Q91Y10 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Pcdhac1Q91Y10 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhac1Q91Y10 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhac1Q91Y10 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhac1Q91Y10 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhac1Q91Y10 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
Pcdhac1Q91Y10 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhac1Q91Y10 Mir5130-201ENSMUST00000175160 84 ntBASIC15.12■□□□□ 0.01
Pcdhac1Q91Y10 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC15.12■□□□□ 0.01
Pcdhac1Q91Y10 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC15.12■□□□□ 0.01
Pcdhac1Q91Y10 Gm7370-201ENSMUST00000219471 767 ntBASIC15.12■□□□□ 0.01
Pcdhac1Q91Y10 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms