Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb3Q91XZ7 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Pcdhb3Q91XZ7 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb3Q91XZ7 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb3Q91XZ7 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb3Q91XZ7 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb3Q91XZ7 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb3Q91XZ7 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb3Q91XZ7 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb3Q91XZ7 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.19■□□□□ 0.18
Pcdhb3Q91XZ7 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb3Q91XZ7 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb3Q91XZ7 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb3Q91XZ7 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb3Q91XZ7 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.19■□□□□ 0.18
Pcdhb3Q91XZ7 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.19■□□□□ 0.18
Pcdhb3Q91XZ7 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb3Q91XZ7 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb3Q91XZ7 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb3Q91XZ7 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
Pcdhb3Q91XZ7 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb3Q91XZ7 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb3Q91XZ7 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.19■□□□□ 0.18
Pcdhb3Q91XZ7 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb3Q91XZ7 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb3Q91XZ7 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb3Q91XZ7 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Pcdhb3Q91XZ7 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb3Q91XZ7 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb3Q91XZ7 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb3Q91XZ7 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb3Q91XZ7 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb3Q91XZ7 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb3Q91XZ7 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb3Q91XZ7 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb3Q91XZ7 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb3Q91XZ7 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb3Q91XZ7 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb3Q91XZ7 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb3Q91XZ7 Gm7977-201ENSMUST00000193787 748 ntBASIC16.18■□□□□ 0.18
Pcdhb3Q91XZ7 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Pcdhb3Q91XZ7 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.18■□□□□ 0.18
Pcdhb3Q91XZ7 Gm21814-202ENSMUST00000203277 873 ntBASIC16.18■□□□□ 0.18
Pcdhb3Q91XZ7 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb3Q91XZ7 AC135963.1-201ENSMUST00000211640 717 ntBASIC16.18■□□□□ 0.18
Pcdhb3Q91XZ7 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.18■□□□□ 0.18
Pcdhb3Q91XZ7 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC16.18■□□□□ 0.18
Pcdhb3Q91XZ7 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb3Q91XZ7 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb3Q91XZ7 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb3Q91XZ7 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb3Q91XZ7 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb3Q91XZ7 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Pcdhb3Q91XZ7 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Pcdhb3Q91XZ7 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Pcdhb3Q91XZ7 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb3Q91XZ7 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Pcdhb3Q91XZ7 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb3Q91XZ7 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Pcdhb3Q91XZ7 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb3Q91XZ7 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb3Q91XZ7 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Pcdhb3Q91XZ7 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Pcdhb3Q91XZ7 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb3Q91XZ7 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb3Q91XZ7 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb3Q91XZ7 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb3Q91XZ7 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb3Q91XZ7 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb3Q91XZ7 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb3Q91XZ7 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb3Q91XZ7 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.17■□□□□ 0.18
Pcdhb3Q91XZ7 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Pcdhb3Q91XZ7 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC16.17■□□□□ 0.18
Pcdhb3Q91XZ7 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC16.17■□□□□ 0.18
Pcdhb3Q91XZ7 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb3Q91XZ7 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb3Q91XZ7 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb3Q91XZ7 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Pcdhb3Q91XZ7 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb3Q91XZ7 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb3Q91XZ7 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Pcdhb3Q91XZ7 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb3Q91XZ7 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC16.17■□□□□ 0.18
Pcdhb3Q91XZ7 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb3Q91XZ7 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC16.17■□□□□ 0.18
Pcdhb3Q91XZ7 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb3Q91XZ7 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb3Q91XZ7 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb3Q91XZ7 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb3Q91XZ7 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb3Q91XZ7 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb3Q91XZ7 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb3Q91XZ7 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb3Q91XZ7 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb3Q91XZ7 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb3Q91XZ7 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb3Q91XZ7 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb3Q91XZ7 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.16■□□□□ 0.18
Pcdhb3Q91XZ7 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms