Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhga3Q91XY5 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhga3Q91XY5 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhga3Q91XY5 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhga3Q91XY5 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC14.43□□□□□ -0.1
Pcdhga3Q91XY5 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Pcdhga3Q91XY5 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhga3Q91XY5 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhga3Q91XY5 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC14.42□□□□□ -0.1
Pcdhga3Q91XY5 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhga3Q91XY5 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhga3Q91XY5 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhga3Q91XY5 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhga3Q91XY5 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhga3Q91XY5 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhga3Q91XY5 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhga3Q91XY5 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
Pcdhga3Q91XY5 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhga3Q91XY5 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC14.42□□□□□ -0.1
Pcdhga3Q91XY5 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Pcdhga3Q91XY5 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhga3Q91XY5 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhga3Q91XY5 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhga3Q91XY5 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Pcdhga3Q91XY5 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhga3Q91XY5 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhga3Q91XY5 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Pcdhga3Q91XY5 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhga3Q91XY5 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhga3Q91XY5 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhga3Q91XY5 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhga3Q91XY5 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhga3Q91XY5 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhga3Q91XY5 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhga3Q91XY5 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhga3Q91XY5 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhga3Q91XY5 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC14.41□□□□□ -0.1
Pcdhga3Q91XY5 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Pcdhga3Q91XY5 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhga3Q91XY5 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhga3Q91XY5 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhga3Q91XY5 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhga3Q91XY5 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhga3Q91XY5 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhga3Q91XY5 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhga3Q91XY5 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhga3Q91XY5 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhga3Q91XY5 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Pcdhga3Q91XY5 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC14.41□□□□□ -0.1
Pcdhga3Q91XY5 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhga3Q91XY5 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhga3Q91XY5 Gm3272-201ENSMUST00000181181 1229 ntBASIC14.41□□□□□ -0.1
Pcdhga3Q91XY5 Gm18101-201ENSMUST00000215769 548 ntBASIC14.41□□□□□ -0.1
Pcdhga3Q91XY5 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhga3Q91XY5 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Pcdhga3Q91XY5 Gm10566-201ENSMUST00000086739 996 ntBASIC14.41□□□□□ -0.1
Pcdhga3Q91XY5 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Pcdhga3Q91XY5 Gfra2-202ENSMUST00000227633 1480 ntBASIC14.41□□□□□ -0.1
Pcdhga3Q91XY5 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhga3Q91XY5 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhga3Q91XY5 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhga3Q91XY5 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhga3Q91XY5 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhga3Q91XY5 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhga3Q91XY5 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Pcdhga3Q91XY5 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhga3Q91XY5 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhga3Q91XY5 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhga3Q91XY5 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhga3Q91XY5 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC14.41□□□□□ -0.1
Pcdhga3Q91XY5 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Pcdhga3Q91XY5 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhga3Q91XY5 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga3Q91XY5 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga3Q91XY5 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC14.4□□□□□ -0.1
Pcdhga3Q91XY5 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
Pcdhga3Q91XY5 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga3Q91XY5 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga3Q91XY5 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga3Q91XY5 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Pcdhga3Q91XY5 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga3Q91XY5 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga3Q91XY5 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga3Q91XY5 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.4□□□□□ -0.1
Pcdhga3Q91XY5 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga3Q91XY5 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga3Q91XY5 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga3Q91XY5 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga3Q91XY5 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga3Q91XY5 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga3Q91XY5 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga3Q91XY5 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga3Q91XY5 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga3Q91XY5 Gm22697-201ENSMUST00000175194 63 ntBASIC14.4□□□□□ -0.1
Pcdhga3Q91XY5 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga3Q91XY5 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC14.4□□□□□ -0.1
Pcdhga3Q91XY5 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Pcdhga3Q91XY5 AC122351.1-201ENSMUST00000220467 126 ntBASIC14.4□□□□□ -0.1
Pcdhga3Q91XY5 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga3Q91XY5 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms