Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhga4Q91XY4 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhga4Q91XY4 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC15.94■□□□□ 0.14
Pcdhga4Q91XY4 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC15.94■□□□□ 0.14
Pcdhga4Q91XY4 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC15.94■□□□□ 0.14
Pcdhga4Q91XY4 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhga4Q91XY4 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhga4Q91XY4 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhga4Q91XY4 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhga4Q91XY4 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhga4Q91XY4 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Pcdhga4Q91XY4 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhga4Q91XY4 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhga4Q91XY4 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhga4Q91XY4 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhga4Q91XY4 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhga4Q91XY4 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.14
Pcdhga4Q91XY4 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhga4Q91XY4 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhga4Q91XY4 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC15.93■□□□□ 0.14
Pcdhga4Q91XY4 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhga4Q91XY4 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Pcdhga4Q91XY4 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.93■□□□□ 0.14
Pcdhga4Q91XY4 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhga4Q91XY4 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhga4Q91XY4 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
Pcdhga4Q91XY4 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhga4Q91XY4 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhga4Q91XY4 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhga4Q91XY4 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhga4Q91XY4 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhga4Q91XY4 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhga4Q91XY4 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhga4Q91XY4 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhga4Q91XY4 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.93■□□□□ 0.14
Pcdhga4Q91XY4 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Pcdhga4Q91XY4 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhga4Q91XY4 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhga4Q91XY4 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC15.93■□□□□ 0.14
Pcdhga4Q91XY4 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhga4Q91XY4 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhga4Q91XY4 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhga4Q91XY4 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Pcdhga4Q91XY4 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhga4Q91XY4 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhga4Q91XY4 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhga4Q91XY4 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhga4Q91XY4 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhga4Q91XY4 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhga4Q91XY4 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhga4Q91XY4 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhga4Q91XY4 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC15.92■□□□□ 0.14
Pcdhga4Q91XY4 Gm44450-201ENSMUST00000199528 114 ntBASIC15.92■□□□□ 0.14
Pcdhga4Q91XY4 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhga4Q91XY4 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhga4Q91XY4 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhga4Q91XY4 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Pcdhga4Q91XY4 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Pcdhga4Q91XY4 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Pcdhga4Q91XY4 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhga4Q91XY4 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhga4Q91XY4 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhga4Q91XY4 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhga4Q91XY4 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhga4Q91XY4 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhga4Q91XY4 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhga4Q91XY4 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Pcdhga4Q91XY4 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhga4Q91XY4 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhga4Q91XY4 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhga4Q91XY4 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhga4Q91XY4 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhga4Q91XY4 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhga4Q91XY4 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhga4Q91XY4 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Pcdhga4Q91XY4 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhga4Q91XY4 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhga4Q91XY4 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC15.91■□□□□ 0.14
Pcdhga4Q91XY4 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhga4Q91XY4 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhga4Q91XY4 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhga4Q91XY4 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhga4Q91XY4 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhga4Q91XY4 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhga4Q91XY4 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC15.91■□□□□ 0.14
Pcdhga4Q91XY4 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhga4Q91XY4 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Pcdhga4Q91XY4 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhga4Q91XY4 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Pcdhga4Q91XY4 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
Pcdhga4Q91XY4 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
Pcdhga4Q91XY4 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhga4Q91XY4 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.9■□□□□ 0.14
Pcdhga4Q91XY4 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhga4Q91XY4 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Pcdhga4Q91XY4 Gm37812-201ENSMUST00000195216 2475 ntBASIC15.9■□□□□ 0.14
Pcdhga4Q91XY4 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhga4Q91XY4 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.9■□□□□ 0.14
Pcdhga4Q91XY4 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhga4Q91XY4 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms