Protein–RNA interactions for Protein: Q91XX5

Pcdhgb5, Protocadherin gamma B5, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb5Q91XX5 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhgb5Q91XX5 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhgb5Q91XX5 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhgb5Q91XX5 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcdhgb5Q91XX5 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhgb5Q91XX5 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhgb5Q91XX5 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhgb5Q91XX5 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16■□□□□ 0.15
Pcdhgb5Q91XX5 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhgb5Q91XX5 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcdhgb5Q91XX5 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Pcdhgb5Q91XX5 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16■□□□□ 0.15
Pcdhgb5Q91XX5 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhgb5Q91XX5 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC16■□□□□ 0.15
Pcdhgb5Q91XX5 Gm25406-201ENSMUST00000157599 105 ntBASIC16■□□□□ 0.15
Pcdhgb5Q91XX5 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC16■□□□□ 0.15
Pcdhgb5Q91XX5 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhgb5Q91XX5 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcdhgb5Q91XX5 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC16■□□□□ 0.15
Pcdhgb5Q91XX5 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhgb5Q91XX5 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhgb5Q91XX5 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhgb5Q91XX5 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16■□□□□ 0.15
Pcdhgb5Q91XX5 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhgb5Q91XX5 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhgb5Q91XX5 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhgb5Q91XX5 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhgb5Q91XX5 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhgb5Q91XX5 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16■□□□□ 0.15
Pcdhgb5Q91XX5 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhgb5Q91XX5 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhgb5Q91XX5 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhgb5Q91XX5 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhgb5Q91XX5 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC15.99■□□□□ 0.15
Pcdhgb5Q91XX5 AC154527.4-201ENSMUST00000224364 1667 ntBASIC15.99■□□□□ 0.15
Pcdhgb5Q91XX5 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Pcdhgb5Q91XX5 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhgb5Q91XX5 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC15.99■□□□□ 0.15
Pcdhgb5Q91XX5 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhgb5Q91XX5 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC15.99■□□□□ 0.15
Pcdhgb5Q91XX5 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC15.99■□□□□ 0.15
Pcdhgb5Q91XX5 Gm5364-201ENSMUST00000216789 889 ntBASIC15.99■□□□□ 0.15
Pcdhgb5Q91XX5 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhgb5Q91XX5 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhgb5Q91XX5 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Pcdhgb5Q91XX5 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhgb5Q91XX5 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhgb5Q91XX5 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Pcdhgb5Q91XX5 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhgb5Q91XX5 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
Pcdhgb5Q91XX5 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhgb5Q91XX5 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhgb5Q91XX5 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhgb5Q91XX5 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Pcdhgb5Q91XX5 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhgb5Q91XX5 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhgb5Q91XX5 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhgb5Q91XX5 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
Pcdhgb5Q91XX5 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhgb5Q91XX5 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Pcdhgb5Q91XX5 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhgb5Q91XX5 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhgb5Q91XX5 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhgb5Q91XX5 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC15.98■□□□□ 0.15
Pcdhgb5Q91XX5 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhgb5Q91XX5 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhgb5Q91XX5 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhgb5Q91XX5 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC15.98■□□□□ 0.15
Pcdhgb5Q91XX5 Gm37500-201ENSMUST00000192059 1443 ntBASIC15.98■□□□□ 0.15
Pcdhgb5Q91XX5 AV026068-213ENSMUST00000223675 1171 ntBASIC15.98■□□□□ 0.15
Pcdhgb5Q91XX5 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhgb5Q91XX5 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhgb5Q91XX5 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhgb5Q91XX5 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhgb5Q91XX5 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhgb5Q91XX5 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhgb5Q91XX5 Gm6598-201ENSMUST00000202719 2615 ntBASIC15.98■□□□□ 0.15
Pcdhgb5Q91XX5 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhgb5Q91XX5 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhgb5Q91XX5 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhgb5Q91XX5 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhgb5Q91XX5 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhgb5Q91XX5 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhgb5Q91XX5 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhgb5Q91XX5 Gm7222-201ENSMUST00000117512 906 ntBASIC15.97■□□□□ 0.15
Pcdhgb5Q91XX5 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhgb5Q91XX5 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC15.97■□□□□ 0.15
Pcdhgb5Q91XX5 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC15.97■□□□□ 0.15
Pcdhgb5Q91XX5 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
Pcdhgb5Q91XX5 Gm6089-201ENSMUST00000197666 938 ntBASIC15.97■□□□□ 0.15
Pcdhgb5Q91XX5 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhgb5Q91XX5 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhgb5Q91XX5 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Pcdhgb5Q91XX5 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhgb5Q91XX5 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhgb5Q91XX5 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhgb5Q91XX5 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhgb5Q91XX5 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhgb5Q91XX5 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhgb5Q91XX5 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms