Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhgc5Q91XW9 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Pcdhgc5Q91XW9 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhgc5Q91XW9 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhgc5Q91XW9 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhgc5Q91XW9 Gm8839-201ENSMUST00000121279 1645 ntBASIC18.38■□□□□ 0.53
Pcdhgc5Q91XW9 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhgc5Q91XW9 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhgc5Q91XW9 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhgc5Q91XW9 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhgc5Q91XW9 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Pcdhgc5Q91XW9 Gm15165-201ENSMUST00000118140 502 ntBASIC18.38■□□□□ 0.53
Pcdhgc5Q91XW9 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhgc5Q91XW9 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC18.38■□□□□ 0.53
Pcdhgc5Q91XW9 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhgc5Q91XW9 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhgc5Q91XW9 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhgc5Q91XW9 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhgc5Q91XW9 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhgc5Q91XW9 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhgc5Q91XW9 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhgc5Q91XW9 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhgc5Q91XW9 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhgc5Q91XW9 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhgc5Q91XW9 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhgc5Q91XW9 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhgc5Q91XW9 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhgc5Q91XW9 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhgc5Q91XW9 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhgc5Q91XW9 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC18.37■□□□□ 0.53
Pcdhgc5Q91XW9 Rprl3-201ENSMUST00000157400 290 ntBASIC18.37■□□□□ 0.53
Pcdhgc5Q91XW9 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC18.37■□□□□ 0.53
Pcdhgc5Q91XW9 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
Pcdhgc5Q91XW9 Gm10060-201ENSMUST00000212002 111 ntBASIC18.37■□□□□ 0.53
Pcdhgc5Q91XW9 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhgc5Q91XW9 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhgc5Q91XW9 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Pcdhgc5Q91XW9 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhgc5Q91XW9 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC18.37■□□□□ 0.53
Pcdhgc5Q91XW9 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhgc5Q91XW9 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhgc5Q91XW9 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhgc5Q91XW9 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Pcdhgc5Q91XW9 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhgc5Q91XW9 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhgc5Q91XW9 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.36■□□□□ 0.53
Pcdhgc5Q91XW9 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhgc5Q91XW9 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhgc5Q91XW9 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhgc5Q91XW9 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhgc5Q91XW9 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC18.36■□□□□ 0.53
Pcdhgc5Q91XW9 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhgc5Q91XW9 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhgc5Q91XW9 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhgc5Q91XW9 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Pcdhgc5Q91XW9 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhgc5Q91XW9 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC18.36■□□□□ 0.53
Pcdhgc5Q91XW9 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhgc5Q91XW9 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.36■□□□□ 0.53
Pcdhgc5Q91XW9 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhgc5Q91XW9 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Pcdhgc5Q91XW9 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhgc5Q91XW9 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Pcdhgc5Q91XW9 Gm18856-201ENSMUST00000178096 1374 ntBASIC18.35■□□□□ 0.53
Pcdhgc5Q91XW9 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhgc5Q91XW9 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhgc5Q91XW9 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhgc5Q91XW9 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhgc5Q91XW9 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC18.35■□□□□ 0.53
Pcdhgc5Q91XW9 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhgc5Q91XW9 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhgc5Q91XW9 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Pcdhgc5Q91XW9 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhgc5Q91XW9 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhgc5Q91XW9 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Pcdhgc5Q91XW9 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Pcdhgc5Q91XW9 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhgc5Q91XW9 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhgc5Q91XW9 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhgc5Q91XW9 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhgc5Q91XW9 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhgc5Q91XW9 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhgc5Q91XW9 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhgc5Q91XW9 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhgc5Q91XW9 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhgc5Q91XW9 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Pcdhgc5Q91XW9 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhgc5Q91XW9 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Pcdhgc5Q91XW9 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhgc5Q91XW9 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhgc5Q91XW9 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhgc5Q91XW9 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhgc5Q91XW9 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhgc5Q91XW9 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC18.34■□□□□ 0.53
Pcdhgc5Q91XW9 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC18.34■□□□□ 0.53
Pcdhgc5Q91XW9 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhgc5Q91XW9 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhgc5Q91XW9 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Pcdhgc5Q91XW9 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhgc5Q91XW9 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms