Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Pcdh18Q8VHR0 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Pcdh18Q8VHR0 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh18Q8VHR0 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh18Q8VHR0 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh18Q8VHR0 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC15.61■□□□□ 0.09
Pcdh18Q8VHR0 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh18Q8VHR0 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh18Q8VHR0 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
Pcdh18Q8VHR0 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh18Q8VHR0 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh18Q8VHR0 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh18Q8VHR0 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh18Q8VHR0 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh18Q8VHR0 Gm12085-201ENSMUST00000119263 940 ntBASIC15.61■□□□□ 0.09
Pcdh18Q8VHR0 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC15.61■□□□□ 0.09
Pcdh18Q8VHR0 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
Pcdh18Q8VHR0 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh18Q8VHR0 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh18Q8VHR0 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC15.61■□□□□ 0.09
Pcdh18Q8VHR0 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh18Q8VHR0 Gm7712-202ENSMUST00000222331 1510 ntBASIC15.61■□□□□ 0.09
Pcdh18Q8VHR0 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh18Q8VHR0 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh18Q8VHR0 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Pcdh18Q8VHR0 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh18Q8VHR0 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh18Q8VHR0 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh18Q8VHR0 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh18Q8VHR0 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh18Q8VHR0 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh18Q8VHR0 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Pcdh18Q8VHR0 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh18Q8VHR0 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Pcdh18Q8VHR0 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh18Q8VHR0 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
Pcdh18Q8VHR0 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh18Q8VHR0 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh18Q8VHR0 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Pcdh18Q8VHR0 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Pcdh18Q8VHR0 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC15.6■□□□□ 0.09
Pcdh18Q8VHR0 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh18Q8VHR0 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC15.6■□□□□ 0.09
Pcdh18Q8VHR0 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh18Q8VHR0 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC15.6■□□□□ 0.09
Pcdh18Q8VHR0 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh18Q8VHR0 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh18Q8VHR0 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Pcdh18Q8VHR0 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh18Q8VHR0 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh18Q8VHR0 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh18Q8VHR0 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Pcdh18Q8VHR0 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh18Q8VHR0 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh18Q8VHR0 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh18Q8VHR0 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh18Q8VHR0 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh18Q8VHR0 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Pcdh18Q8VHR0 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh18Q8VHR0 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh18Q8VHR0 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh18Q8VHR0 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh18Q8VHR0 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Pcdh18Q8VHR0 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Pcdh18Q8VHR0 Gm8520-201ENSMUST00000186517 868 ntBASIC15.59■□□□□ 0.09
Pcdh18Q8VHR0 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh18Q8VHR0 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh18Q8VHR0 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC15.59■□□□□ 0.09
Pcdh18Q8VHR0 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh18Q8VHR0 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC15.59■□□□□ 0.09
Pcdh18Q8VHR0 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh18Q8VHR0 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh18Q8VHR0 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh18Q8VHR0 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh18Q8VHR0 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh18Q8VHR0 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh18Q8VHR0 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Pcdh18Q8VHR0 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh18Q8VHR0 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Pcdh18Q8VHR0 Gm10676-201ENSMUST00000098778 3221 ntBASIC15.58■□□□□ 0.09
Pcdh18Q8VHR0 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Pcdh18Q8VHR0 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Pcdh18Q8VHR0 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Pcdh18Q8VHR0 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Pcdh18Q8VHR0 Gm37019-201ENSMUST00000192133 2134 ntBASIC15.58■□□□□ 0.08
Pcdh18Q8VHR0 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC15.58■□□□□ 0.08
Pcdh18Q8VHR0 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdh18Q8VHR0 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Pcdh18Q8VHR0 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdh18Q8VHR0 Mir1199-201ENSMUST00000117015 119 ntBASIC15.58■□□□□ 0.08
Pcdh18Q8VHR0 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdh18Q8VHR0 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
Pcdh18Q8VHR0 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdh18Q8VHR0 AC154649.1-201ENSMUST00000227392 384 ntBASIC15.58■□□□□ 0.08
Pcdh18Q8VHR0 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.58■□□□□ 0.08
Pcdh18Q8VHR0 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdh18Q8VHR0 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdh18Q8VHR0 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdh18Q8VHR0 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdh18Q8VHR0 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms