Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rpa1Q8VEE4 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Rpa1Q8VEE4 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rpa1Q8VEE4 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rpa1Q8VEE4 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.33■□□□□ 0.2
Rpa1Q8VEE4 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.32■□□□□ 0.2
Rpa1Q8VEE4 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rpa1Q8VEE4 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rpa1Q8VEE4 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rpa1Q8VEE4 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rpa1Q8VEE4 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rpa1Q8VEE4 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rpa1Q8VEE4 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Rpa1Q8VEE4 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC16.32■□□□□ 0.2
Rpa1Q8VEE4 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rpa1Q8VEE4 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rpa1Q8VEE4 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.32■□□□□ 0.2
Rpa1Q8VEE4 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.32■□□□□ 0.2
Rpa1Q8VEE4 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rpa1Q8VEE4 Gm9731-201ENSMUST00000209480 747 ntBASIC16.32■□□□□ 0.2
Rpa1Q8VEE4 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
Rpa1Q8VEE4 CT025689.6-201ENSMUST00000224991 1104 ntBASIC16.32■□□□□ 0.2
Rpa1Q8VEE4 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rpa1Q8VEE4 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rpa1Q8VEE4 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rpa1Q8VEE4 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rpa1Q8VEE4 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Rpa1Q8VEE4 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rpa1Q8VEE4 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpa1Q8VEE4 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpa1Q8VEE4 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpa1Q8VEE4 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpa1Q8VEE4 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rpa1Q8VEE4 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rpa1Q8VEE4 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpa1Q8VEE4 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.31■□□□□ 0.2
Rpa1Q8VEE4 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpa1Q8VEE4 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC16.31■□□□□ 0.2
Rpa1Q8VEE4 Gm43183-201ENSMUST00000200632 547 ntBASIC16.31■□□□□ 0.2
Rpa1Q8VEE4 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpa1Q8VEE4 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpa1Q8VEE4 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rpa1Q8VEE4 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpa1Q8VEE4 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpa1Q8VEE4 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Rpa1Q8VEE4 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpa1Q8VEE4 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
Rpa1Q8VEE4 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpa1Q8VEE4 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpa1Q8VEE4 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rpa1Q8VEE4 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rpa1Q8VEE4 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rpa1Q8VEE4 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC16.3■□□□□ 0.2
Rpa1Q8VEE4 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rpa1Q8VEE4 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.3■□□□□ 0.2
Rpa1Q8VEE4 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Rpa1Q8VEE4 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rpa1Q8VEE4 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rpa1Q8VEE4 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Rpa1Q8VEE4 Gm20049-201ENSMUST00000219950 730 ntBASIC16.3■□□□□ 0.2
Rpa1Q8VEE4 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rpa1Q8VEE4 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rpa1Q8VEE4 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rpa1Q8VEE4 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rpa1Q8VEE4 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Rpa1Q8VEE4 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Rpa1Q8VEE4 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rpa1Q8VEE4 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rpa1Q8VEE4 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Rpa1Q8VEE4 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rpa1Q8VEE4 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rpa1Q8VEE4 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.29■□□□□ 0.2
Rpa1Q8VEE4 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rpa1Q8VEE4 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpa1Q8VEE4 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpa1Q8VEE4 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rpa1Q8VEE4 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rpa1Q8VEE4 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpa1Q8VEE4 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpa1Q8VEE4 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpa1Q8VEE4 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpa1Q8VEE4 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpa1Q8VEE4 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpa1Q8VEE4 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Rpa1Q8VEE4 Gm5297-201ENSMUST00000198555 1171 ntBASIC16.29■□□□□ 0.2
Rpa1Q8VEE4 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC16.29■□□□□ 0.2
Rpa1Q8VEE4 AC154532.1-201ENSMUST00000227860 965 ntBASIC16.29■□□□□ 0.2
Rpa1Q8VEE4 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpa1Q8VEE4 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpa1Q8VEE4 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpa1Q8VEE4 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpa1Q8VEE4 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpa1Q8VEE4 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Rpa1Q8VEE4 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpa1Q8VEE4 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpa1Q8VEE4 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpa1Q8VEE4 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpa1Q8VEE4 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpa1Q8VEE4 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.28■□□□□ 0.2
Rpa1Q8VEE4 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms