Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lsm1Q8VC85 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Lsm1Q8VC85 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lsm1Q8VC85 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Lsm1Q8VC85 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC15.52■□□□□ 0.08
Lsm1Q8VC85 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.52■□□□□ 0.08
Lsm1Q8VC85 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Lsm1Q8VC85 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Lsm1Q8VC85 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Lsm1Q8VC85 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Lsm1Q8VC85 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Lsm1Q8VC85 Prob1-201ENSMUST00000097619 3021 ntBASIC15.52■□□□□ 0.08
Lsm1Q8VC85 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Lsm1Q8VC85 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Lsm1Q8VC85 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Lsm1Q8VC85 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Lsm1Q8VC85 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Lsm1Q8VC85 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Lsm1Q8VC85 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC15.52■□□□□ 0.08
Lsm1Q8VC85 Gm7889-201ENSMUST00000185591 958 ntBASIC15.52■□□□□ 0.08
Lsm1Q8VC85 Gm45058-201ENSMUST00000205810 766 ntBASIC15.52■□□□□ 0.08
Lsm1Q8VC85 AC112142.1-201ENSMUST00000228796 918 ntBASIC15.52■□□□□ 0.08
Lsm1Q8VC85 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Lsm1Q8VC85 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC15.52■□□□□ 0.08
Lsm1Q8VC85 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Lsm1Q8VC85 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Lsm1Q8VC85 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Lsm1Q8VC85 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.07
Lsm1Q8VC85 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Lsm1Q8VC85 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Lsm1Q8VC85 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
Lsm1Q8VC85 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Lsm1Q8VC85 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Lsm1Q8VC85 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
Lsm1Q8VC85 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Lsm1Q8VC85 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lsm1Q8VC85 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Lsm1Q8VC85 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.51■□□□□ 0.07
Lsm1Q8VC85 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lsm1Q8VC85 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lsm1Q8VC85 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lsm1Q8VC85 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Lsm1Q8VC85 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lsm1Q8VC85 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lsm1Q8VC85 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Lsm1Q8VC85 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Lsm1Q8VC85 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Lsm1Q8VC85 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lsm1Q8VC85 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lsm1Q8VC85 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Lsm1Q8VC85 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lsm1Q8VC85 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.51■□□□□ 0.07
Lsm1Q8VC85 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lsm1Q8VC85 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lsm1Q8VC85 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lsm1Q8VC85 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Lsm1Q8VC85 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lsm1Q8VC85 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lsm1Q8VC85 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lsm1Q8VC85 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Lsm1Q8VC85 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Lsm1Q8VC85 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Lsm1Q8VC85 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Lsm1Q8VC85 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Lsm1Q8VC85 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Lsm1Q8VC85 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Lsm1Q8VC85 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.5■□□□□ 0.07
Lsm1Q8VC85 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC15.5■□□□□ 0.07
Lsm1Q8VC85 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Lsm1Q8VC85 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Lsm1Q8VC85 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Lsm1Q8VC85 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Lsm1Q8VC85 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC15.5■□□□□ 0.07
Lsm1Q8VC85 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Lsm1Q8VC85 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC15.5■□□□□ 0.07
Lsm1Q8VC85 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Lsm1Q8VC85 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Lsm1Q8VC85 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Lsm1Q8VC85 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Lsm1Q8VC85 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Lsm1Q8VC85 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Lsm1Q8VC85 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Lsm1Q8VC85 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Lsm1Q8VC85 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Lsm1Q8VC85 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.5■□□□□ 0.07
Lsm1Q8VC85 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC15.5■□□□□ 0.07
Lsm1Q8VC85 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Lsm1Q8VC85 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Lsm1Q8VC85 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Lsm1Q8VC85 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Lsm1Q8VC85 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Lsm1Q8VC85 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Lsm1Q8VC85 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Lsm1Q8VC85 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Lsm1Q8VC85 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Lsm1Q8VC85 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Lsm1Q8VC85 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Lsm1Q8VC85 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Lsm1Q8VC85 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Lsm1Q8VC85 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms