Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nup35Q8R4R6 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nup35Q8R4R6 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nup35Q8R4R6 Gm7712-202ENSMUST00000222331 1510 ntBASIC13.23□□□□□ -0.29
Nup35Q8R4R6 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC13.23□□□□□ -0.29
Nup35Q8R4R6 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nup35Q8R4R6 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nup35Q8R4R6 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nup35Q8R4R6 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nup35Q8R4R6 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nup35Q8R4R6 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nup35Q8R4R6 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC13.22□□□□□ -0.29
Nup35Q8R4R6 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nup35Q8R4R6 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Nup35Q8R4R6 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC13.22□□□□□ -0.29
Nup35Q8R4R6 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nup35Q8R4R6 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Nup35Q8R4R6 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Nup35Q8R4R6 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Nup35Q8R4R6 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nup35Q8R4R6 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Nup35Q8R4R6 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nup35Q8R4R6 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
Nup35Q8R4R6 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nup35Q8R4R6 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nup35Q8R4R6 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nup35Q8R4R6 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
Nup35Q8R4R6 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nup35Q8R4R6 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nup35Q8R4R6 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nup35Q8R4R6 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nup35Q8R4R6 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nup35Q8R4R6 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nup35Q8R4R6 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nup35Q8R4R6 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nup35Q8R4R6 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nup35Q8R4R6 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nup35Q8R4R6 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nup35Q8R4R6 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC13.21□□□□□ -0.29
Nup35Q8R4R6 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC13.21□□□□□ -0.29
Nup35Q8R4R6 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nup35Q8R4R6 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nup35Q8R4R6 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nup35Q8R4R6 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nup35Q8R4R6 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nup35Q8R4R6 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nup35Q8R4R6 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
Nup35Q8R4R6 Gm15378-201ENSMUST00000121894 207 ntBASIC13.21□□□□□ -0.29
Nup35Q8R4R6 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC13.21□□□□□ -0.29
Nup35Q8R4R6 Gm7791-201ENSMUST00000219066 539 ntBASIC13.21□□□□□ -0.29
Nup35Q8R4R6 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC13.21□□□□□ -0.29
Nup35Q8R4R6 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nup35Q8R4R6 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nup35Q8R4R6 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nup35Q8R4R6 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nup35Q8R4R6 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nup35Q8R4R6 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nup35Q8R4R6 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nup35Q8R4R6 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC13.21□□□□□ -0.3
Nup35Q8R4R6 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nup35Q8R4R6 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Nup35Q8R4R6 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.3
Nup35Q8R4R6 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Nup35Q8R4R6 AC163637.1-201ENSMUST00000215491 1894 ntBASIC13.21□□□□□ -0.3
Nup35Q8R4R6 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nup35Q8R4R6 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Nup35Q8R4R6 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Nup35Q8R4R6 Gm44729-201ENSMUST00000206759 2052 ntBASIC13.2□□□□□ -0.3
Nup35Q8R4R6 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nup35Q8R4R6 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nup35Q8R4R6 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nup35Q8R4R6 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nup35Q8R4R6 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nup35Q8R4R6 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nup35Q8R4R6 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nup35Q8R4R6 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nup35Q8R4R6 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Nup35Q8R4R6 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC13.2□□□□□ -0.3
Nup35Q8R4R6 Gm13186-201ENSMUST00000118031 316 ntBASIC13.2□□□□□ -0.3
Nup35Q8R4R6 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC13.2□□□□□ -0.3
Nup35Q8R4R6 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Nup35Q8R4R6 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nup35Q8R4R6 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nup35Q8R4R6 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nup35Q8R4R6 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Nup35Q8R4R6 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nup35Q8R4R6 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nup35Q8R4R6 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nup35Q8R4R6 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Nup35Q8R4R6 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nup35Q8R4R6 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC13.2□□□□□ -0.3
Nup35Q8R4R6 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC13.2□□□□□ -0.3
Nup35Q8R4R6 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nup35Q8R4R6 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nup35Q8R4R6 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nup35Q8R4R6 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nup35Q8R4R6 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nup35Q8R4R6 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nup35Q8R4R6 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nup35Q8R4R6 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms