Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rtn1Q8K0T0 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC18.66■□□□□ 0.58
Rtn1Q8K0T0 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rtn1Q8K0T0 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC18.66■□□□□ 0.58
Rtn1Q8K0T0 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rtn1Q8K0T0 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rtn1Q8K0T0 Otx2os1-206ENSMUST00000228153 787 ntBASIC18.66■□□□□ 0.58
Rtn1Q8K0T0 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rtn1Q8K0T0 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rtn1Q8K0T0 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rtn1Q8K0T0 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rtn1Q8K0T0 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rtn1Q8K0T0 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rtn1Q8K0T0 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rtn1Q8K0T0 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rtn1Q8K0T0 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rtn1Q8K0T0 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rtn1Q8K0T0 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rtn1Q8K0T0 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rtn1Q8K0T0 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rtn1Q8K0T0 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rtn1Q8K0T0 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rtn1Q8K0T0 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Rtn1Q8K0T0 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rtn1Q8K0T0 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Rtn1Q8K0T0 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rtn1Q8K0T0 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rtn1Q8K0T0 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rtn1Q8K0T0 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Rtn1Q8K0T0 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rtn1Q8K0T0 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC18.65■□□□□ 0.58
Rtn1Q8K0T0 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rtn1Q8K0T0 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rtn1Q8K0T0 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Rtn1Q8K0T0 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
Rtn1Q8K0T0 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rtn1Q8K0T0 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Rtn1Q8K0T0 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rtn1Q8K0T0 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rtn1Q8K0T0 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rtn1Q8K0T0 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rtn1Q8K0T0 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rtn1Q8K0T0 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rtn1Q8K0T0 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rtn1Q8K0T0 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC18.64■□□□□ 0.57
Rtn1Q8K0T0 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC18.64■□□□□ 0.57
Rtn1Q8K0T0 AC114585.2-202ENSMUST00000228094 426 ntBASIC18.64■□□□□ 0.57
Rtn1Q8K0T0 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rtn1Q8K0T0 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rtn1Q8K0T0 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rtn1Q8K0T0 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rtn1Q8K0T0 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rtn1Q8K0T0 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rtn1Q8K0T0 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rtn1Q8K0T0 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Rtn1Q8K0T0 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC18.63■□□□□ 0.57
Rtn1Q8K0T0 Gm45412-201ENSMUST00000210217 2275 ntBASIC18.63■□□□□ 0.57
Rtn1Q8K0T0 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rtn1Q8K0T0 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rtn1Q8K0T0 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rtn1Q8K0T0 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Rtn1Q8K0T0 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rtn1Q8K0T0 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rtn1Q8K0T0 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rtn1Q8K0T0 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC18.63■□□□□ 0.57
Rtn1Q8K0T0 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rtn1Q8K0T0 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC18.63■□□□□ 0.57
Rtn1Q8K0T0 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Rtn1Q8K0T0 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC18.63■□□□□ 0.57
Rtn1Q8K0T0 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rtn1Q8K0T0 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rtn1Q8K0T0 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Rtn1Q8K0T0 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rtn1Q8K0T0 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rtn1Q8K0T0 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rtn1Q8K0T0 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rtn1Q8K0T0 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC18.63■□□□□ 0.57
Rtn1Q8K0T0 Gm43072-201ENSMUST00000200283 1671 ntBASIC18.63■□□□□ 0.57
Rtn1Q8K0T0 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Rtn1Q8K0T0 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rtn1Q8K0T0 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC18.62■□□□□ 0.57
Rtn1Q8K0T0 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rtn1Q8K0T0 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.62■□□□□ 0.57
Rtn1Q8K0T0 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rtn1Q8K0T0 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rtn1Q8K0T0 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Rtn1Q8K0T0 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rtn1Q8K0T0 AC153794.1-201ENSMUST00000169148 126 ntBASIC18.62■□□□□ 0.57
Rtn1Q8K0T0 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rtn1Q8K0T0 Gm7367-201ENSMUST00000057611 492 ntBASIC18.62■□□□□ 0.57
Rtn1Q8K0T0 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rtn1Q8K0T0 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rtn1Q8K0T0 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rtn1Q8K0T0 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
Rtn1Q8K0T0 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rtn1Q8K0T0 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rtn1Q8K0T0 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rtn1Q8K0T0 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rtn1Q8K0T0 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rtn1Q8K0T0 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms