Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Gm13882-201ENSMUST00000120886 1002 ntBASIC20.87■□□□□ 0.93
Rab11fip3Q8CHD8 Gm10284-201ENSMUST00000145057 1005 ntBASIC20.87■□□□□ 0.93
Rab11fip3Q8CHD8 Gm10481-201ENSMUST00000179228 1002 ntBASIC20.87■□□□□ 0.93
Rab11fip3Q8CHD8 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC20.87■□□□□ 0.93
Rab11fip3Q8CHD8 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC20.87■□□□□ 0.93
Rab11fip3Q8CHD8 Gm2574-201ENSMUST00000181051 1002 ntBASIC20.87■□□□□ 0.93
Rab11fip3Q8CHD8 Gm3200-201ENSMUST00000181493 1002 ntBASIC20.87■□□□□ 0.93
Rab11fip3Q8CHD8 Gm8825-201ENSMUST00000182565 998 ntBASIC20.87■□□□□ 0.93
Rab11fip3Q8CHD8 Gm4518-201ENSMUST00000182638 718 ntBASIC20.87■□□□□ 0.93
Rab11fip3Q8CHD8 Gm8330-201ENSMUST00000182754 1008 ntBASIC20.87■□□□□ 0.93
Rab11fip3Q8CHD8 Gm4575-201ENSMUST00000182991 1002 ntBASIC20.87■□□□□ 0.93
Rab11fip3Q8CHD8 Gm8709-201ENSMUST00000183230 1012 ntBASIC20.87■□□□□ 0.93
Rab11fip3Q8CHD8 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Rab11fip3Q8CHD8 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC20.87■□□□□ 0.93
Rab11fip3Q8CHD8 Gm10293-201ENSMUST00000076317 1002 ntBASIC20.87■□□□□ 0.93
Rab11fip3Q8CHD8 Gm6316-201ENSMUST00000082064 1020 ntBASIC20.87■□□□□ 0.93
Rab11fip3Q8CHD8 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rab11fip3Q8CHD8 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rab11fip3Q8CHD8 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rab11fip3Q8CHD8 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rab11fip3Q8CHD8 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Rab11fip3Q8CHD8 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rab11fip3Q8CHD8 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC20.87■□□□□ 0.93
Rab11fip3Q8CHD8 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rab11fip3Q8CHD8 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rab11fip3Q8CHD8 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rab11fip3Q8CHD8 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rab11fip3Q8CHD8 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rab11fip3Q8CHD8 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rab11fip3Q8CHD8 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC20.86■□□□□ 0.93
Rab11fip3Q8CHD8 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC20.86■□□□□ 0.93
Rab11fip3Q8CHD8 Gm12350-201ENSMUST00000121208 462 ntBASIC20.86■□□□□ 0.93
Rab11fip3Q8CHD8 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rab11fip3Q8CHD8 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rab11fip3Q8CHD8 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC20.86■□□□□ 0.93
Rab11fip3Q8CHD8 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC20.86■□□□□ 0.93
Rab11fip3Q8CHD8 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rab11fip3Q8CHD8 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rab11fip3Q8CHD8 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rab11fip3Q8CHD8 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rab11fip3Q8CHD8 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rab11fip3Q8CHD8 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rab11fip3Q8CHD8 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rab11fip3Q8CHD8 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Rab11fip3Q8CHD8 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Rab11fip3Q8CHD8 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC20.85■□□□□ 0.93
Rab11fip3Q8CHD8 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
Rab11fip3Q8CHD8 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rab11fip3Q8CHD8 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rab11fip3Q8CHD8 Mir5126-201ENSMUST00000175513 77 ntBASIC20.85■□□□□ 0.93
Rab11fip3Q8CHD8 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC20.85■□□□□ 0.93
Rab11fip3Q8CHD8 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
Rab11fip3Q8CHD8 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rab11fip3Q8CHD8 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rab11fip3Q8CHD8 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rab11fip3Q8CHD8 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC20.85■□□□□ 0.93
Rab11fip3Q8CHD8 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Rab11fip3Q8CHD8 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Rab11fip3Q8CHD8 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Rab11fip3Q8CHD8 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC20.85■□□□□ 0.93
Rab11fip3Q8CHD8 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rab11fip3Q8CHD8 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rab11fip3Q8CHD8 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rab11fip3Q8CHD8 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Rab11fip3Q8CHD8 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Rab11fip3Q8CHD8 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rab11fip3Q8CHD8 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rab11fip3Q8CHD8 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rab11fip3Q8CHD8 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
Rab11fip3Q8CHD8 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC20.84■□□□□ 0.93
Rab11fip3Q8CHD8 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rab11fip3Q8CHD8 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
Rab11fip3Q8CHD8 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC20.84■□□□□ 0.93
Rab11fip3Q8CHD8 AW822252-206ENSMUST00000208904 237 ntBASIC20.84■□□□□ 0.93
Rab11fip3Q8CHD8 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC20.84■□□□□ 0.93
Rab11fip3Q8CHD8 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC20.84■□□□□ 0.93
Rab11fip3Q8CHD8 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rab11fip3Q8CHD8 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Rab11fip3Q8CHD8 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rab11fip3Q8CHD8 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Rab11fip3Q8CHD8 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rab11fip3Q8CHD8 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rab11fip3Q8CHD8 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rab11fip3Q8CHD8 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC20.83■□□□□ 0.93
Rab11fip3Q8CHD8 Ddx41-204ENSMUST00000224765 2199 ntBASIC20.83■□□□□ 0.93
Rab11fip3Q8CHD8 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rab11fip3Q8CHD8 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Rab11fip3Q8CHD8 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rab11fip3Q8CHD8 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC20.83■□□□□ 0.93
Rab11fip3Q8CHD8 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC20.83■□□□□ 0.93
Rab11fip3Q8CHD8 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Rab11fip3Q8CHD8 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rab11fip3Q8CHD8 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Rab11fip3Q8CHD8 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rab11fip3Q8CHD8 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rab11fip3Q8CHD8 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rab11fip3Q8CHD8 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rab11fip3Q8CHD8 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rab11fip3Q8CHD8 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rab11fip3Q8CHD8 Gm1401-201ENSMUST00000122048 772 ntBASIC20.82■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms