Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Depdc1bQ8BH88 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Depdc1bQ8BH88 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Depdc1bQ8BH88 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Depdc1bQ8BH88 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Depdc1bQ8BH88 Gm44450-201ENSMUST00000199528 114 ntBASIC17.59■□□□□ 0.41
Depdc1bQ8BH88 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Depdc1bQ8BH88 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Depdc1bQ8BH88 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC17.59■□□□□ 0.41
Depdc1bQ8BH88 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC17.59■□□□□ 0.41
Depdc1bQ8BH88 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Depdc1bQ8BH88 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Depdc1bQ8BH88 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Depdc1bQ8BH88 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Depdc1bQ8BH88 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Depdc1bQ8BH88 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Depdc1bQ8BH88 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC17.59■□□□□ 0.41
Depdc1bQ8BH88 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Depdc1bQ8BH88 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Depdc1bQ8BH88 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.58■□□□□ 0.41
Depdc1bQ8BH88 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Depdc1bQ8BH88 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Depdc1bQ8BH88 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Depdc1bQ8BH88 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Depdc1bQ8BH88 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Depdc1bQ8BH88 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Depdc1bQ8BH88 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Depdc1bQ8BH88 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Depdc1bQ8BH88 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Depdc1bQ8BH88 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Depdc1bQ8BH88 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Depdc1bQ8BH88 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Depdc1bQ8BH88 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.58■□□□□ 0.4
Depdc1bQ8BH88 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.58■□□□□ 0.4
Depdc1bQ8BH88 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Depdc1bQ8BH88 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Depdc1bQ8BH88 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Depdc1bQ8BH88 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Depdc1bQ8BH88 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Depdc1bQ8BH88 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Depdc1bQ8BH88 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Depdc1bQ8BH88 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Depdc1bQ8BH88 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Depdc1bQ8BH88 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC17.57■□□□□ 0.4
Depdc1bQ8BH88 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Depdc1bQ8BH88 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Depdc1bQ8BH88 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Depdc1bQ8BH88 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Depdc1bQ8BH88 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Depdc1bQ8BH88 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Depdc1bQ8BH88 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Depdc1bQ8BH88 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Depdc1bQ8BH88 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Depdc1bQ8BH88 Gm11336-201ENSMUST00000118168 334 ntBASIC17.57■□□□□ 0.4
Depdc1bQ8BH88 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC17.57■□□□□ 0.4
Depdc1bQ8BH88 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC17.57■□□□□ 0.4
Depdc1bQ8BH88 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.57■□□□□ 0.4
Depdc1bQ8BH88 Gm17807-201ENSMUST00000186869 298 ntBASIC17.57■□□□□ 0.4
Depdc1bQ8BH88 Gm37722-201ENSMUST00000193757 208 ntBASIC17.57■□□□□ 0.4
Depdc1bQ8BH88 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Depdc1bQ8BH88 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Depdc1bQ8BH88 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Depdc1bQ8BH88 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Depdc1bQ8BH88 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Depdc1bQ8BH88 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Depdc1bQ8BH88 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.57■□□□□ 0.4
Depdc1bQ8BH88 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Depdc1bQ8BH88 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Depdc1bQ8BH88 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Depdc1bQ8BH88 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Depdc1bQ8BH88 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Depdc1bQ8BH88 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Depdc1bQ8BH88 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
Depdc1bQ8BH88 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Depdc1bQ8BH88 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Depdc1bQ8BH88 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.56■□□□□ 0.4
Depdc1bQ8BH88 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Depdc1bQ8BH88 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Depdc1bQ8BH88 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.56■□□□□ 0.4
Depdc1bQ8BH88 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Depdc1bQ8BH88 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Depdc1bQ8BH88 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Depdc1bQ8BH88 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.56■□□□□ 0.4
Depdc1bQ8BH88 Gm18421-201ENSMUST00000204122 625 ntBASIC17.56■□□□□ 0.4
Depdc1bQ8BH88 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Depdc1bQ8BH88 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Depdc1bQ8BH88 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Depdc1bQ8BH88 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Depdc1bQ8BH88 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Depdc1bQ8BH88 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
Depdc1bQ8BH88 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Depdc1bQ8BH88 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Depdc1bQ8BH88 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Depdc1bQ8BH88 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Depdc1bQ8BH88 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Depdc1bQ8BH88 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Depdc1bQ8BH88 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Depdc1bQ8BH88 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Depdc1bQ8BH88 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Depdc1bQ8BH88 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms