Protein–RNA interactions for Protein: Q80TR4

Slit1, Slit homolog 1 protein, mousemouse

Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slit1Q80TR4 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Slit1Q80TR4 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slit1Q80TR4 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slit1Q80TR4 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC20.54■□□□□ 0.88
Slit1Q80TR4 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Slit1Q80TR4 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Slit1Q80TR4 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC20.54■□□□□ 0.88
Slit1Q80TR4 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slit1Q80TR4 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slit1Q80TR4 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slit1Q80TR4 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slit1Q80TR4 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slit1Q80TR4 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slit1Q80TR4 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slit1Q80TR4 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slit1Q80TR4 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Slit1Q80TR4 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slit1Q80TR4 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slit1Q80TR4 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Slit1Q80TR4 Gm5312-201ENSMUST00000203728 547 ntBASIC20.53■□□□□ 0.88
Slit1Q80TR4 AC139382.1-201ENSMUST00000221402 498 ntBASIC20.53■□□□□ 0.88
Slit1Q80TR4 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Slit1Q80TR4 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slit1Q80TR4 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Slit1Q80TR4 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slit1Q80TR4 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slit1Q80TR4 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC20.53■□□□□ 0.88
Slit1Q80TR4 Gm6598-201ENSMUST00000202719 2615 ntBASIC20.53■□□□□ 0.88
Slit1Q80TR4 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slit1Q80TR4 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Slit1Q80TR4 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC20.53■□□□□ 0.88
Slit1Q80TR4 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
Slit1Q80TR4 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slit1Q80TR4 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Slit1Q80TR4 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Slit1Q80TR4 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Slit1Q80TR4 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Slit1Q80TR4 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC20.52■□□□□ 0.88
Slit1Q80TR4 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Slit1Q80TR4 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Slit1Q80TR4 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
Slit1Q80TR4 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Slit1Q80TR4 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Slit1Q80TR4 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Slit1Q80TR4 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Slit1Q80TR4 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Slit1Q80TR4 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Slit1Q80TR4 Gm11745-201ENSMUST00000121669 448 ntBASIC20.52■□□□□ 0.87
Slit1Q80TR4 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Slit1Q80TR4 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Slit1Q80TR4 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
Slit1Q80TR4 Gm44335-201ENSMUST00000196879 141 ntBASIC20.52■□□□□ 0.87
Slit1Q80TR4 Gm44297-201ENSMUST00000198304 141 ntBASIC20.52■□□□□ 0.87
Slit1Q80TR4 Gm44346-201ENSMUST00000198851 141 ntBASIC20.52■□□□□ 0.87
Slit1Q80TR4 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Slit1Q80TR4 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Slit1Q80TR4 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slit1Q80TR4 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Slit1Q80TR4 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Slit1Q80TR4 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC20.51■□□□□ 0.87
Slit1Q80TR4 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slit1Q80TR4 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC20.51■□□□□ 0.87
Slit1Q80TR4 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slit1Q80TR4 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Slit1Q80TR4 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slit1Q80TR4 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slit1Q80TR4 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slit1Q80TR4 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Slit1Q80TR4 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC20.51■□□□□ 0.87
Slit1Q80TR4 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slit1Q80TR4 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Slit1Q80TR4 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC20.51■□□□□ 0.87
Slit1Q80TR4 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Slit1Q80TR4 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Slit1Q80TR4 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slit1Q80TR4 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slit1Q80TR4 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slit1Q80TR4 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC20.5■□□□□ 0.87
Slit1Q80TR4 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Slit1Q80TR4 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slit1Q80TR4 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slit1Q80TR4 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slit1Q80TR4 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Slit1Q80TR4 Mir7036b-201ENSMUST00000184791 63 ntBASIC20.5■□□□□ 0.87
Slit1Q80TR4 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slit1Q80TR4 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slit1Q80TR4 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slit1Q80TR4 Gm5898-201ENSMUST00000121016 2071 ntBASIC20.5■□□□□ 0.87
Slit1Q80TR4 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Slit1Q80TR4 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slit1Q80TR4 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slit1Q80TR4 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slit1Q80TR4 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slit1Q80TR4 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slit1Q80TR4 Gm8839-201ENSMUST00000121279 1645 ntBASIC20.49■□□□□ 0.87
Slit1Q80TR4 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slit1Q80TR4 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slit1Q80TR4 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slit1Q80TR4 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slit1Q80TR4 Nrn1-204ENSMUST00000224323 1779 ntBASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms