Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rfx4Q7TNK1 Wnt10b-204ENSMUST00000226655 1807 ntBASIC15.57■□□□□ 0.08
Rfx4Q7TNK1 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.57■□□□□ 0.08
Rfx4Q7TNK1 AC163637.1-201ENSMUST00000215491 1894 ntBASIC15.57■□□□□ 0.08
Rfx4Q7TNK1 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rfx4Q7TNK1 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
Rfx4Q7TNK1 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rfx4Q7TNK1 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC15.57■□□□□ 0.08
Rfx4Q7TNK1 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC15.57■□□□□ 0.08
Rfx4Q7TNK1 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC15.57■□□□□ 0.08
Rfx4Q7TNK1 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC15.57■□□□□ 0.08
Rfx4Q7TNK1 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rfx4Q7TNK1 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Rfx4Q7TNK1 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rfx4Q7TNK1 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rfx4Q7TNK1 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.57■□□□□ 0.08
Rfx4Q7TNK1 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rfx4Q7TNK1 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rfx4Q7TNK1 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Rfx4Q7TNK1 Actl10-202ENSMUST00000226583 1501 ntBASIC15.57■□□□□ 0.08
Rfx4Q7TNK1 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Rfx4Q7TNK1 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rfx4Q7TNK1 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rfx4Q7TNK1 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rfx4Q7TNK1 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Rfx4Q7TNK1 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rfx4Q7TNK1 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rfx4Q7TNK1 Gm42901-201ENSMUST00000197735 3171 ntBASIC15.57■□□□□ 0.08
Rfx4Q7TNK1 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rfx4Q7TNK1 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rfx4Q7TNK1 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rfx4Q7TNK1 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rfx4Q7TNK1 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rfx4Q7TNK1 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
Rfx4Q7TNK1 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.56■□□□□ 0.08
Rfx4Q7TNK1 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Rfx4Q7TNK1 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC15.56■□□□□ 0.08
Rfx4Q7TNK1 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rfx4Q7TNK1 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rfx4Q7TNK1 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.56■□□□□ 0.08
Rfx4Q7TNK1 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC15.56■□□□□ 0.08
Rfx4Q7TNK1 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Rfx4Q7TNK1 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC15.56■□□□□ 0.08
Rfx4Q7TNK1 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rfx4Q7TNK1 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rfx4Q7TNK1 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rfx4Q7TNK1 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rfx4Q7TNK1 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC15.56■□□□□ 0.08
Rfx4Q7TNK1 Gm6190-201ENSMUST00000220683 1374 ntBASIC15.56■□□□□ 0.08
Rfx4Q7TNK1 AC124581.1-201ENSMUST00000225416 1399 ntBASIC15.56■□□□□ 0.08
Rfx4Q7TNK1 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rfx4Q7TNK1 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rfx4Q7TNK1 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rfx4Q7TNK1 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rfx4Q7TNK1 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rfx4Q7TNK1 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rfx4Q7TNK1 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rfx4Q7TNK1 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rfx4Q7TNK1 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rfx4Q7TNK1 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Rfx4Q7TNK1 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rfx4Q7TNK1 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rfx4Q7TNK1 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rfx4Q7TNK1 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rfx4Q7TNK1 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rfx4Q7TNK1 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rfx4Q7TNK1 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rfx4Q7TNK1 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rfx4Q7TNK1 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rfx4Q7TNK1 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Rfx4Q7TNK1 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rfx4Q7TNK1 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rfx4Q7TNK1 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rfx4Q7TNK1 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rfx4Q7TNK1 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rfx4Q7TNK1 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Rfx4Q7TNK1 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.55■□□□□ 0.08
Rfx4Q7TNK1 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rfx4Q7TNK1 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rfx4Q7TNK1 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rfx4Q7TNK1 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rfx4Q7TNK1 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rfx4Q7TNK1 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rfx4Q7TNK1 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC15.55■□□□□ 0.08
Rfx4Q7TNK1 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rfx4Q7TNK1 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC15.55■□□□□ 0.08
Rfx4Q7TNK1 Gm18666-201ENSMUST00000190039 958 ntBASIC15.55■□□□□ 0.08
Rfx4Q7TNK1 Gm43183-201ENSMUST00000200632 547 ntBASIC15.55■□□□□ 0.08
Rfx4Q7TNK1 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC15.55■□□□□ 0.08
Rfx4Q7TNK1 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rfx4Q7TNK1 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rfx4Q7TNK1 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rfx4Q7TNK1 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rfx4Q7TNK1 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rfx4Q7TNK1 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Rfx4Q7TNK1 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rfx4Q7TNK1 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.55■□□□□ 0.08
Rfx4Q7TNK1 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rfx4Q7TNK1 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rfx4Q7TNK1 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms