Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Gm10060-201ENSMUST00000212002 111 ntBASIC19.33■□□□□ 0.69
Npc1l1Q6T3U4 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Npc1l1Q6T3U4 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Npc1l1Q6T3U4 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Npc1l1Q6T3U4 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Npc1l1Q6T3U4 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Npc1l1Q6T3U4 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Npc1l1Q6T3U4 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Npc1l1Q6T3U4 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Npc1l1Q6T3U4 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Npc1l1Q6T3U4 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Npc1l1Q6T3U4 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Npc1l1Q6T3U4 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Npc1l1Q6T3U4 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Npc1l1Q6T3U4 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Npc1l1Q6T3U4 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Npc1l1Q6T3U4 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Npc1l1Q6T3U4 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Npc1l1Q6T3U4 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Npc1l1Q6T3U4 Gm12350-201ENSMUST00000121208 462 ntBASIC19.32■□□□□ 0.68
Npc1l1Q6T3U4 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC19.32■□□□□ 0.68
Npc1l1Q6T3U4 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
Npc1l1Q6T3U4 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Npc1l1Q6T3U4 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC19.32■□□□□ 0.68
Npc1l1Q6T3U4 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Npc1l1Q6T3U4 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Npc1l1Q6T3U4 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Npc1l1Q6T3U4 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Npc1l1Q6T3U4 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Npc1l1Q6T3U4 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Npc1l1Q6T3U4 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Npc1l1Q6T3U4 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Npc1l1Q6T3U4 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
Npc1l1Q6T3U4 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Npc1l1Q6T3U4 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Npc1l1Q6T3U4 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Npc1l1Q6T3U4 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Npc1l1Q6T3U4 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC19.32■□□□□ 0.68
Npc1l1Q6T3U4 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Npc1l1Q6T3U4 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC19.32■□□□□ 0.68
Npc1l1Q6T3U4 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Npc1l1Q6T3U4 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Npc1l1Q6T3U4 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Npc1l1Q6T3U4 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Npc1l1Q6T3U4 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Npc1l1Q6T3U4 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC19.31■□□□□ 0.68
Npc1l1Q6T3U4 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC19.31■□□□□ 0.68
Npc1l1Q6T3U4 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC19.31■□□□□ 0.68
Npc1l1Q6T3U4 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Npc1l1Q6T3U4 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Npc1l1Q6T3U4 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Npc1l1Q6T3U4 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC19.31■□□□□ 0.68
Npc1l1Q6T3U4 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Npc1l1Q6T3U4 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Npc1l1Q6T3U4 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Npc1l1Q6T3U4 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Npc1l1Q6T3U4 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Npc1l1Q6T3U4 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Npc1l1Q6T3U4 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Npc1l1Q6T3U4 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Npc1l1Q6T3U4 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Npc1l1Q6T3U4 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Npc1l1Q6T3U4 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Npc1l1Q6T3U4 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC19.3■□□□□ 0.68
Npc1l1Q6T3U4 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC19.3■□□□□ 0.68
Npc1l1Q6T3U4 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Npc1l1Q6T3U4 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC19.3■□□□□ 0.68
Npc1l1Q6T3U4 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC19.3■□□□□ 0.68
Npc1l1Q6T3U4 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Npc1l1Q6T3U4 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Npc1l1Q6T3U4 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Npc1l1Q6T3U4 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Npc1l1Q6T3U4 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Npc1l1Q6T3U4 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Npc1l1Q6T3U4 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Npc1l1Q6T3U4 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC19.3■□□□□ 0.68
Npc1l1Q6T3U4 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
Npc1l1Q6T3U4 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Npc1l1Q6T3U4 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC19.3■□□□□ 0.68
Npc1l1Q6T3U4 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Npc1l1Q6T3U4 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Npc1l1Q6T3U4 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Npc1l1Q6T3U4 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Npc1l1Q6T3U4 Gm12497-201ENSMUST00000138778 237 ntBASIC19.29■□□□□ 0.68
Npc1l1Q6T3U4 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Npc1l1Q6T3U4 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC19.29■□□□□ 0.68
Npc1l1Q6T3U4 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC19.29■□□□□ 0.68
Npc1l1Q6T3U4 Gm43073-201ENSMUST00000198200 1189 ntBASIC19.29■□□□□ 0.68
Npc1l1Q6T3U4 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC19.29■□□□□ 0.68
Npc1l1Q6T3U4 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Npc1l1Q6T3U4 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC19.29■□□□□ 0.68
Npc1l1Q6T3U4 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Npc1l1Q6T3U4 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Npc1l1Q6T3U4 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Npc1l1Q6T3U4 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC19.29■□□□□ 0.68
Npc1l1Q6T3U4 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Npc1l1Q6T3U4 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Npc1l1Q6T3U4 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Npc1l1Q6T3U4 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Npc1l1Q6T3U4 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms