Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Abcf1Q6P542 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Abcf1Q6P542 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Abcf1Q6P542 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Abcf1Q6P542 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Abcf1Q6P542 Il3ra-202ENSMUST00000223589 738 ntBASIC18.13■□□□□ 0.49
Abcf1Q6P542 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Abcf1Q6P542 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Abcf1Q6P542 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC18.13■□□□□ 0.49
Abcf1Q6P542 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Abcf1Q6P542 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Abcf1Q6P542 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
Abcf1Q6P542 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Abcf1Q6P542 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC18.13■□□□□ 0.49
Abcf1Q6P542 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Abcf1Q6P542 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Abcf1Q6P542 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
Abcf1Q6P542 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Abcf1Q6P542 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
Abcf1Q6P542 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Abcf1Q6P542 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Abcf1Q6P542 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Abcf1Q6P542 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Abcf1Q6P542 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.12■□□□□ 0.49
Abcf1Q6P542 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Abcf1Q6P542 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Abcf1Q6P542 Gm10231-201ENSMUST00000181584 441 ntBASIC18.12■□□□□ 0.49
Abcf1Q6P542 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Abcf1Q6P542 Gm10175-202ENSMUST00000208752 441 ntBASIC18.12■□□□□ 0.49
Abcf1Q6P542 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Abcf1Q6P542 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Abcf1Q6P542 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Abcf1Q6P542 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Abcf1Q6P542 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Abcf1Q6P542 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Abcf1Q6P542 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Abcf1Q6P542 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Abcf1Q6P542 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Abcf1Q6P542 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Abcf1Q6P542 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Abcf1Q6P542 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Abcf1Q6P542 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Abcf1Q6P542 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Abcf1Q6P542 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Abcf1Q6P542 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.11■□□□□ 0.49
Abcf1Q6P542 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Abcf1Q6P542 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC18.11■□□□□ 0.49
Abcf1Q6P542 Mir5130-201ENSMUST00000175160 84 ntBASIC18.11■□□□□ 0.49
Abcf1Q6P542 Gm45058-201ENSMUST00000205810 766 ntBASIC18.11■□□□□ 0.49
Abcf1Q6P542 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Abcf1Q6P542 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Abcf1Q6P542 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Abcf1Q6P542 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.11■□□□□ 0.49
Abcf1Q6P542 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Abcf1Q6P542 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Abcf1Q6P542 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Abcf1Q6P542 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Abcf1Q6P542 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Abcf1Q6P542 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Abcf1Q6P542 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC18.11■□□□□ 0.49
Abcf1Q6P542 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Abcf1Q6P542 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Abcf1Q6P542 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Abcf1Q6P542 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Abcf1Q6P542 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Abcf1Q6P542 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Abcf1Q6P542 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Abcf1Q6P542 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Abcf1Q6P542 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Abcf1Q6P542 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC18.1■□□□□ 0.49
Abcf1Q6P542 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC18.1■□□□□ 0.49
Abcf1Q6P542 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.1■□□□□ 0.49
Abcf1Q6P542 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.1■□□□□ 0.49
Abcf1Q6P542 Prob1-201ENSMUST00000097619 3021 ntBASIC18.1■□□□□ 0.49
Abcf1Q6P542 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Abcf1Q6P542 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC18.1■□□□□ 0.49
Abcf1Q6P542 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Abcf1Q6P542 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Abcf1Q6P542 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Abcf1Q6P542 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Abcf1Q6P542 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
Abcf1Q6P542 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Abcf1Q6P542 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Abcf1Q6P542 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Abcf1Q6P542 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Abcf1Q6P542 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Abcf1Q6P542 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Abcf1Q6P542 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Abcf1Q6P542 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Abcf1Q6P542 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Abcf1Q6P542 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Abcf1Q6P542 Gm13474-201ENSMUST00000122466 815 ntBASIC18.09■□□□□ 0.49
Abcf1Q6P542 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Abcf1Q6P542 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC18.09■□□□□ 0.49
Abcf1Q6P542 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Abcf1Q6P542 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Abcf1Q6P542 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Abcf1Q6P542 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Abcf1Q6P542 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Abcf1Q6P542 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms