Protein–RNA interactions for Protein: Q62233

Six3, Homeobox protein SIX3, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six3Q62233 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Six3Q62233 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Six3Q62233 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Six3Q62233 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.82■□□□□ 0.12
Six3Q62233 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Six3Q62233 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Six3Q62233 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Six3Q62233 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Six3Q62233 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Six3Q62233 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Six3Q62233 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Six3Q62233 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Six3Q62233 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
Six3Q62233 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Six3Q62233 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC15.81■□□□□ 0.12
Six3Q62233 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Six3Q62233 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Six3Q62233 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Six3Q62233 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Six3Q62233 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC15.81■□□□□ 0.12
Six3Q62233 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Six3Q62233 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Six3Q62233 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC15.81■□□□□ 0.12
Six3Q62233 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Six3Q62233 Gm10252-201ENSMUST00000209541 832 ntBASIC15.81■□□□□ 0.12
Six3Q62233 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC15.81■□□□□ 0.12
Six3Q62233 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Six3Q62233 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.81■□□□□ 0.12
Six3Q62233 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Six3Q62233 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Six3Q62233 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Six3Q62233 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Six3Q62233 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Six3Q62233 Prob1-201ENSMUST00000097619 3021 ntBASIC15.81■□□□□ 0.12
Six3Q62233 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Six3Q62233 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Six3Q62233 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Six3Q62233 Gm16011-201ENSMUST00000121567 2662 ntBASIC15.81■□□□□ 0.12
Six3Q62233 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.81■□□□□ 0.12
Six3Q62233 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Six3Q62233 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC15.8■□□□□ 0.12
Six3Q62233 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Six3Q62233 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Six3Q62233 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Six3Q62233 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Six3Q62233 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Six3Q62233 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Six3Q62233 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Six3Q62233 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Six3Q62233 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Six3Q62233 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Six3Q62233 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
Six3Q62233 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Six3Q62233 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC15.8■□□□□ 0.12
Six3Q62233 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC15.8■□□□□ 0.12
Six3Q62233 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Six3Q62233 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Six3Q62233 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Six3Q62233 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC15.8■□□□□ 0.12
Six3Q62233 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Six3Q62233 AC153881.2-201ENSMUST00000214877 204 ntBASIC15.8■□□□□ 0.12
Six3Q62233 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Six3Q62233 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Six3Q62233 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Six3Q62233 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Six3Q62233 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Six3Q62233 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Six3Q62233 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Six3Q62233 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Six3Q62233 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Six3Q62233 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Six3Q62233 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Six3Q62233 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Six3Q62233 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.79■□□□□ 0.12
Six3Q62233 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Six3Q62233 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Six3Q62233 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Six3Q62233 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Six3Q62233 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Six3Q62233 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Six3Q62233 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Six3Q62233 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
Six3Q62233 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC15.79■□□□□ 0.12
Six3Q62233 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Six3Q62233 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC15.79■□□□□ 0.12
Six3Q62233 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Six3Q62233 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Six3Q62233 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.79■□□□□ 0.12
Six3Q62233 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Six3Q62233 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Six3Q62233 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC15.79■□□□□ 0.12
Six3Q62233 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Six3Q62233 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Six3Q62233 AC153526.5-201ENSMUST00000218661 2147 ntBASIC15.79■□□□□ 0.12
Six3Q62233 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Six3Q62233 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Six3Q62233 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Six3Q62233 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Six3Q62233 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Six3Q62233 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms