Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Notch3Q61982 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.42□□□□□ -0.42
Notch3Q61982 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Notch3Q61982 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Notch3Q61982 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Notch3Q61982 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Notch3Q61982 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Notch3Q61982 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Notch3Q61982 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Notch3Q61982 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Notch3Q61982 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Notch3Q61982 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Notch3Q61982 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Notch3Q61982 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Notch3Q61982 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Notch3Q61982 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC12.41□□□□□ -0.42
Notch3Q61982 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC12.41□□□□□ -0.42
Notch3Q61982 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC12.41□□□□□ -0.42
Notch3Q61982 AC108846.1-201ENSMUST00000214531 513 ntBASIC12.41□□□□□ -0.42
Notch3Q61982 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Notch3Q61982 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Notch3Q61982 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Notch3Q61982 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Notch3Q61982 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Notch3Q61982 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
Notch3Q61982 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Notch3Q61982 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Notch3Q61982 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Notch3Q61982 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC12.41□□□□□ -0.42
Notch3Q61982 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Notch3Q61982 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Notch3Q61982 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Notch3Q61982 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Notch3Q61982 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Notch3Q61982 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Notch3Q61982 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Notch3Q61982 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Notch3Q61982 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Notch3Q61982 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Notch3Q61982 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Notch3Q61982 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC12.4□□□□□ -0.42
Notch3Q61982 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
Notch3Q61982 Gm18421-201ENSMUST00000204122 625 ntBASIC12.4□□□□□ -0.42
Notch3Q61982 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Notch3Q61982 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Notch3Q61982 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Notch3Q61982 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC12.4□□□□□ -0.42
Notch3Q61982 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Notch3Q61982 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Notch3Q61982 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Notch3Q61982 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Notch3Q61982 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Notch3Q61982 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC12.4□□□□□ -0.42
Notch3Q61982 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Notch3Q61982 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC12.4□□□□□ -0.42
Notch3Q61982 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC12.4□□□□□ -0.42
Notch3Q61982 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Notch3Q61982 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Notch3Q61982 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC12.4□□□□□ -0.42
Notch3Q61982 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Notch3Q61982 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Notch3Q61982 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Notch3Q61982 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Notch3Q61982 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Notch3Q61982 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Notch3Q61982 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Notch3Q61982 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Notch3Q61982 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Notch3Q61982 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Notch3Q61982 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Notch3Q61982 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC12.39□□□□□ -0.43
Notch3Q61982 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC12.39□□□□□ -0.43
Notch3Q61982 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Notch3Q61982 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Notch3Q61982 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Notch3Q61982 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Notch3Q61982 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Notch3Q61982 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Notch3Q61982 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Notch3Q61982 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Notch3Q61982 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Notch3Q61982 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Notch3Q61982 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC12.39□□□□□ -0.43
Notch3Q61982 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Notch3Q61982 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Notch3Q61982 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Notch3Q61982 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Notch3Q61982 Rprl3-201ENSMUST00000157400 290 ntBASIC12.39□□□□□ -0.43
Notch3Q61982 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Notch3Q61982 Gm5264-201ENSMUST00000190584 848 ntBASIC12.39□□□□□ -0.43
Notch3Q61982 Gm44450-201ENSMUST00000199528 114 ntBASIC12.39□□□□□ -0.43
Notch3Q61982 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Notch3Q61982 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Notch3Q61982 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Notch3Q61982 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Notch3Q61982 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Notch3Q61982 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Notch3Q61982 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Notch3Q61982 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Notch3Q61982 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms