Protein–RNA interactions for Protein: Q60987

Foxg1, Forkhead box protein G1, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxg1Q60987 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Foxg1Q60987 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Foxg1Q60987 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Foxg1Q60987 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Foxg1Q60987 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.05□□□□□ -0.16
Foxg1Q60987 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Foxg1Q60987 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Foxg1Q60987 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Foxg1Q60987 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Foxg1Q60987 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Foxg1Q60987 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Foxg1Q60987 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Foxg1Q60987 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Foxg1Q60987 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Foxg1Q60987 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Foxg1Q60987 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Foxg1Q60987 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
Foxg1Q60987 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Foxg1Q60987 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
Foxg1Q60987 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Foxg1Q60987 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC14.05□□□□□ -0.16
Foxg1Q60987 Gm15372-201ENSMUST00000120729 834 ntBASIC14.05□□□□□ -0.16
Foxg1Q60987 Gm27741-201ENSMUST00000185060 237 ntBASIC14.05□□□□□ -0.16
Foxg1Q60987 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.05□□□□□ -0.16
Foxg1Q60987 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC14.05□□□□□ -0.16
Foxg1Q60987 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.05□□□□□ -0.16
Foxg1Q60987 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Foxg1Q60987 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Foxg1Q60987 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Foxg1Q60987 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Foxg1Q60987 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Foxg1Q60987 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Foxg1Q60987 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Foxg1Q60987 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC14.04□□□□□ -0.16
Foxg1Q60987 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Foxg1Q60987 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Foxg1Q60987 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Foxg1Q60987 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Foxg1Q60987 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Foxg1Q60987 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Foxg1Q60987 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Foxg1Q60987 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Foxg1Q60987 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Foxg1Q60987 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Foxg1Q60987 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Foxg1Q60987 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Foxg1Q60987 Gm15165-201ENSMUST00000118140 502 ntBASIC14.04□□□□□ -0.16
Foxg1Q60987 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Foxg1Q60987 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Foxg1Q60987 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.04□□□□□ -0.16
Foxg1Q60987 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Foxg1Q60987 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Foxg1Q60987 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Foxg1Q60987 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Foxg1Q60987 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Foxg1Q60987 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Foxg1Q60987 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Foxg1Q60987 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC14.04□□□□□ -0.16
Foxg1Q60987 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
Foxg1Q60987 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Foxg1Q60987 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Foxg1Q60987 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Foxg1Q60987 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Foxg1Q60987 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Foxg1Q60987 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Foxg1Q60987 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Foxg1Q60987 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Foxg1Q60987 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
Foxg1Q60987 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Foxg1Q60987 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Foxg1Q60987 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Foxg1Q60987 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Foxg1Q60987 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC14.03□□□□□ -0.16
Foxg1Q60987 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.03□□□□□ -0.16
Foxg1Q60987 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Foxg1Q60987 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC14.03□□□□□ -0.16
Foxg1Q60987 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.03□□□□□ -0.16
Foxg1Q60987 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Foxg1Q60987 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Foxg1Q60987 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Foxg1Q60987 Birc2-201ENSMUST00000054878 378 ntBASIC14.03□□□□□ -0.16
Foxg1Q60987 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Foxg1Q60987 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Foxg1Q60987 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Foxg1Q60987 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Foxg1Q60987 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Foxg1Q60987 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Foxg1Q60987 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Foxg1Q60987 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Foxg1Q60987 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Foxg1Q60987 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Foxg1Q60987 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Foxg1Q60987 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Foxg1Q60987 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Foxg1Q60987 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Foxg1Q60987 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.02□□□□□ -0.16
Foxg1Q60987 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Foxg1Q60987 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Foxg1Q60987 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Foxg1Q60987 Gm12644-201ENSMUST00000119935 606 ntBASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms