Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC11.72□□□□□ -0.53
Cks1brtQ3UNC9 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cks1brtQ3UNC9 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cks1brtQ3UNC9 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Cks1brtQ3UNC9 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cks1brtQ3UNC9 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cks1brtQ3UNC9 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cks1brtQ3UNC9 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Cks1brtQ3UNC9 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cks1brtQ3UNC9 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cks1brtQ3UNC9 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cks1brtQ3UNC9 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cks1brtQ3UNC9 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cks1brtQ3UNC9 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cks1brtQ3UNC9 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cks1brtQ3UNC9 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC11.71□□□□□ -0.53
Cks1brtQ3UNC9 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cks1brtQ3UNC9 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cks1brtQ3UNC9 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cks1brtQ3UNC9 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cks1brtQ3UNC9 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cks1brtQ3UNC9 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cks1brtQ3UNC9 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cks1brtQ3UNC9 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cks1brtQ3UNC9 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC11.71□□□□□ -0.53
Cks1brtQ3UNC9 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cks1brtQ3UNC9 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cks1brtQ3UNC9 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cks1brtQ3UNC9 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cks1brtQ3UNC9 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC11.71□□□□□ -0.53
Cks1brtQ3UNC9 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Cks1brtQ3UNC9 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cks1brtQ3UNC9 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cks1brtQ3UNC9 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Cks1brtQ3UNC9 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Cks1brtQ3UNC9 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cks1brtQ3UNC9 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Cks1brtQ3UNC9 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cks1brtQ3UNC9 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cks1brtQ3UNC9 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Cks1brtQ3UNC9 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cks1brtQ3UNC9 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cks1brtQ3UNC9 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cks1brtQ3UNC9 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cks1brtQ3UNC9 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Cks1brtQ3UNC9 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cks1brtQ3UNC9 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Cks1brtQ3UNC9 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cks1brtQ3UNC9 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cks1brtQ3UNC9 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cks1brtQ3UNC9 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cks1brtQ3UNC9 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cks1brtQ3UNC9 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cks1brtQ3UNC9 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cks1brtQ3UNC9 AC115863.1-201ENSMUST00000214815 1813 ntBASIC11.7□□□□□ -0.54
Cks1brtQ3UNC9 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cks1brtQ3UNC9 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cks1brtQ3UNC9 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cks1brtQ3UNC9 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Cks1brtQ3UNC9 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cks1brtQ3UNC9 Gm12922-201ENSMUST00000120626 809 ntBASIC11.7□□□□□ -0.54
Cks1brtQ3UNC9 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Cks1brtQ3UNC9 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cks1brtQ3UNC9 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cks1brtQ3UNC9 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cks1brtQ3UNC9 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cks1brtQ3UNC9 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cks1brtQ3UNC9 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cks1brtQ3UNC9 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Cks1brtQ3UNC9 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Cks1brtQ3UNC9 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cks1brtQ3UNC9 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.7□□□□□ -0.54
Cks1brtQ3UNC9 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cks1brtQ3UNC9 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cks1brtQ3UNC9 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cks1brtQ3UNC9 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cks1brtQ3UNC9 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Cks1brtQ3UNC9 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cks1brtQ3UNC9 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cks1brtQ3UNC9 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cks1brtQ3UNC9 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cks1brtQ3UNC9 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cks1brtQ3UNC9 Asic1-205ENSMUST00000228185 1818 ntBASIC11.7□□□□□ -0.54
Cks1brtQ3UNC9 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Cks1brtQ3UNC9 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cks1brtQ3UNC9 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cks1brtQ3UNC9 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cks1brtQ3UNC9 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cks1brtQ3UNC9 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cks1brtQ3UNC9 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cks1brtQ3UNC9 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cks1brtQ3UNC9 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cks1brtQ3UNC9 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
Cks1brtQ3UNC9 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Cks1brtQ3UNC9 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cks1brtQ3UNC9 Gm40848-201ENSMUST00000221998 324 ntBASIC11.69□□□□□ -0.54
Cks1brtQ3UNC9 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cks1brtQ3UNC9 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cks1brtQ3UNC9 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC11.69□□□□□ -0.54
Cks1brtQ3UNC9 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms