Protein–RNA interactions for Protein: Q3ULF4

Spg7, Paraplegin, mousemouse

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg7Q3ULF4 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Spg7Q3ULF4 Gm15590-201ENSMUST00000078419 552 ntBASIC19.21■□□□□ 0.67
Spg7Q3ULF4 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Spg7Q3ULF4 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Spg7Q3ULF4 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC19.21■□□□□ 0.67
Spg7Q3ULF4 Gm3928-201ENSMUST00000121141 1307 ntBASIC19.21■□□□□ 0.67
Spg7Q3ULF4 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Spg7Q3ULF4 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Spg7Q3ULF4 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC19.2■□□□□ 0.66
Spg7Q3ULF4 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Spg7Q3ULF4 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Spg7Q3ULF4 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Spg7Q3ULF4 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC19.2■□□□□ 0.66
Spg7Q3ULF4 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Spg7Q3ULF4 Gm15743-202ENSMUST00000182690 1901 ntBASIC19.2■□□□□ 0.66
Spg7Q3ULF4 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Spg7Q3ULF4 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Spg7Q3ULF4 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Spg7Q3ULF4 Gm4609-201ENSMUST00000106443 1002 ntBASIC19.2■□□□□ 0.66
Spg7Q3ULF4 Gm5138-201ENSMUST00000113842 1002 ntBASIC19.2■□□□□ 0.66
Spg7Q3ULF4 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC19.2■□□□□ 0.66
Spg7Q3ULF4 Gm7222-201ENSMUST00000117512 906 ntBASIC19.2■□□□□ 0.66
Spg7Q3ULF4 Gm15191-201ENSMUST00000117933 1000 ntBASIC19.2■□□□□ 0.66
Spg7Q3ULF4 Gm12182-201ENSMUST00000118655 1008 ntBASIC19.2■□□□□ 0.66
Spg7Q3ULF4 Gm13882-201ENSMUST00000120886 1002 ntBASIC19.2■□□□□ 0.66
Spg7Q3ULF4 Gm10284-201ENSMUST00000145057 1005 ntBASIC19.2■□□□□ 0.66
Spg7Q3ULF4 Gm10481-201ENSMUST00000179228 1002 ntBASIC19.2■□□□□ 0.66
Spg7Q3ULF4 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC19.2■□□□□ 0.66
Spg7Q3ULF4 Gm2574-201ENSMUST00000181051 1002 ntBASIC19.2■□□□□ 0.66
Spg7Q3ULF4 Gm3200-201ENSMUST00000181493 1002 ntBASIC19.2■□□□□ 0.66
Spg7Q3ULF4 Gm8825-201ENSMUST00000182565 998 ntBASIC19.2■□□□□ 0.66
Spg7Q3ULF4 Gm4518-201ENSMUST00000182638 718 ntBASIC19.2■□□□□ 0.66
Spg7Q3ULF4 Gm8330-201ENSMUST00000182754 1008 ntBASIC19.2■□□□□ 0.66
Spg7Q3ULF4 Gm4575-201ENSMUST00000182991 1002 ntBASIC19.2■□□□□ 0.66
Spg7Q3ULF4 Gm8709-201ENSMUST00000183230 1012 ntBASIC19.2■□□□□ 0.66
Spg7Q3ULF4 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Spg7Q3ULF4 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC19.2■□□□□ 0.66
Spg7Q3ULF4 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC19.2■□□□□ 0.66
Spg7Q3ULF4 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Spg7Q3ULF4 Gm10293-201ENSMUST00000076317 1002 ntBASIC19.2■□□□□ 0.66
Spg7Q3ULF4 Gm6316-201ENSMUST00000082064 1020 ntBASIC19.2■□□□□ 0.66
Spg7Q3ULF4 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Spg7Q3ULF4 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC19.2■□□□□ 0.66
Spg7Q3ULF4 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Spg7Q3ULF4 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Spg7Q3ULF4 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Spg7Q3ULF4 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC19.2■□□□□ 0.66
Spg7Q3ULF4 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Spg7Q3ULF4 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Spg7Q3ULF4 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Spg7Q3ULF4 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Spg7Q3ULF4 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Spg7Q3ULF4 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Spg7Q3ULF4 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Spg7Q3ULF4 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Spg7Q3ULF4 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Spg7Q3ULF4 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC19.19■□□□□ 0.66
Spg7Q3ULF4 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Spg7Q3ULF4 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC19.19■□□□□ 0.66
Spg7Q3ULF4 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Spg7Q3ULF4 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Spg7Q3ULF4 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC19.19■□□□□ 0.66
Spg7Q3ULF4 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC19.19■□□□□ 0.66
Spg7Q3ULF4 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
Spg7Q3ULF4 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Spg7Q3ULF4 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Spg7Q3ULF4 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Spg7Q3ULF4 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Spg7Q3ULF4 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Spg7Q3ULF4 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Spg7Q3ULF4 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Spg7Q3ULF4 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Spg7Q3ULF4 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC19.18■□□□□ 0.66
Spg7Q3ULF4 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC19.18■□□□□ 0.66
Spg7Q3ULF4 Gm18622-201ENSMUST00000219361 595 ntBASIC19.18■□□□□ 0.66
Spg7Q3ULF4 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC19.18■□□□□ 0.66
Spg7Q3ULF4 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC19.18■□□□□ 0.66
Spg7Q3ULF4 Psmb5-202ENSMUST00000227257 622 ntBASIC19.18■□□□□ 0.66
Spg7Q3ULF4 Gm5867-201ENSMUST00000063197 592 ntBASIC19.18■□□□□ 0.66
Spg7Q3ULF4 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Spg7Q3ULF4 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Spg7Q3ULF4 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Spg7Q3ULF4 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Spg7Q3ULF4 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Spg7Q3ULF4 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Spg7Q3ULF4 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.18■□□□□ 0.66
Spg7Q3ULF4 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Spg7Q3ULF4 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Spg7Q3ULF4 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
Spg7Q3ULF4 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Spg7Q3ULF4 Gm43294-201ENSMUST00000202850 2490 ntBASIC19.17■□□□□ 0.66
Spg7Q3ULF4 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Spg7Q3ULF4 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Spg7Q3ULF4 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Spg7Q3ULF4 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Spg7Q3ULF4 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Spg7Q3ULF4 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Spg7Q3ULF4 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Spg7Q3ULF4 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC19.17■□□□□ 0.66
Spg7Q3ULF4 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms