Protein–RNA interactions for Protein: P81269

Atf1, Cyclic AMP-dependent transcription factor ATF-1, mousemouse

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf1P81269 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atf1P81269 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Atf1P81269 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Atf1P81269 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atf1P81269 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atf1P81269 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Atf1P81269 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Atf1P81269 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atf1P81269 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atf1P81269 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Atf1P81269 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Atf1P81269 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Atf1P81269 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Atf1P81269 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Atf1P81269 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Atf1P81269 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14□□□□□ -0.17
Atf1P81269 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14□□□□□ -0.17
Atf1P81269 Gm8668-201ENSMUST00000120559 1447 ntBASIC14□□□□□ -0.17
Atf1P81269 Gm32996-201ENSMUST00000199828 1447 ntBASIC14□□□□□ -0.17
Atf1P81269 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC14□□□□□ -0.17
Atf1P81269 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Atf1P81269 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Atf1P81269 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Atf1P81269 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC14□□□□□ -0.17
Atf1P81269 Gm27389-201ENSMUST00000183622 195 ntBASIC14□□□□□ -0.17
Atf1P81269 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC14□□□□□ -0.17
Atf1P81269 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Atf1P81269 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Atf1P81269 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC14□□□□□ -0.17
Atf1P81269 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Atf1P81269 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Atf1P81269 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Atf1P81269 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Atf1P81269 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Atf1P81269 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Atf1P81269 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Atf1P81269 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14□□□□□ -0.17
Atf1P81269 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Atf1P81269 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Atf1P81269 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Atf1P81269 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Atf1P81269 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Atf1P81269 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Atf1P81269 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Atf1P81269 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Atf1P81269 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Atf1P81269 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Atf1P81269 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Atf1P81269 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Atf1P81269 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Atf1P81269 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Atf1P81269 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Atf1P81269 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Atf1P81269 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Atf1P81269 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Atf1P81269 Gm15565-201ENSMUST00000118890 427 ntBASIC13.99□□□□□ -0.17
Atf1P81269 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC13.99□□□□□ -0.17
Atf1P81269 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Atf1P81269 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC13.99□□□□□ -0.17
Atf1P81269 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Atf1P81269 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Atf1P81269 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Atf1P81269 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC13.99□□□□□ -0.17
Atf1P81269 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Atf1P81269 AC134329.2-201ENSMUST00000217897 428 ntBASIC13.99□□□□□ -0.17
Atf1P81269 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Atf1P81269 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Atf1P81269 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Atf1P81269 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC13.99□□□□□ -0.17
Atf1P81269 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Atf1P81269 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC13.99□□□□□ -0.17
Atf1P81269 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC13.99□□□□□ -0.17
Atf1P81269 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Atf1P81269 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Atf1P81269 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC13.99□□□□□ -0.17
Atf1P81269 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Atf1P81269 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Atf1P81269 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Atf1P81269 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Atf1P81269 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Atf1P81269 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Atf1P81269 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Atf1P81269 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC13.99□□□□□ -0.17
Atf1P81269 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Atf1P81269 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Atf1P81269 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Atf1P81269 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Atf1P81269 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Atf1P81269 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Atf1P81269 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Atf1P81269 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Atf1P81269 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Atf1P81269 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Atf1P81269 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Atf1P81269 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Atf1P81269 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Atf1P81269 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Atf1P81269 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Atf1P81269 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
Atf1P81269 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 186.9 ms