Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sec61a1P61620 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sec61a1P61620 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sec61a1P61620 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sec61a1P61620 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sec61a1P61620 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sec61a1P61620 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Sec61a1P61620 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sec61a1P61620 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sec61a1P61620 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sec61a1P61620 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Sec61a1P61620 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sec61a1P61620 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
Sec61a1P61620 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sec61a1P61620 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sec61a1P61620 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sec61a1P61620 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sec61a1P61620 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sec61a1P61620 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Sec61a1P61620 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Sec61a1P61620 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC14.27□□□□□ -0.13
Sec61a1P61620 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Sec61a1P61620 Gm18959-201ENSMUST00000208954 655 ntBASIC14.27□□□□□ -0.13
Sec61a1P61620 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sec61a1P61620 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sec61a1P61620 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Sec61a1P61620 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sec61a1P61620 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sec61a1P61620 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.27□□□□□ -0.13
Sec61a1P61620 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sec61a1P61620 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Sec61a1P61620 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sec61a1P61620 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sec61a1P61620 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Sec61a1P61620 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sec61a1P61620 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sec61a1P61620 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Sec61a1P61620 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Sec61a1P61620 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sec61a1P61620 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sec61a1P61620 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sec61a1P61620 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sec61a1P61620 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Sec61a1P61620 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sec61a1P61620 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sec61a1P61620 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sec61a1P61620 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Sec61a1P61620 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Sec61a1P61620 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.26□□□□□ -0.13
Sec61a1P61620 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sec61a1P61620 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sec61a1P61620 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sec61a1P61620 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sec61a1P61620 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sec61a1P61620 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sec61a1P61620 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC14.26□□□□□ -0.13
Sec61a1P61620 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC14.26□□□□□ -0.13
Sec61a1P61620 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sec61a1P61620 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sec61a1P61620 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sec61a1P61620 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Sec61a1P61620 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sec61a1P61620 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sec61a1P61620 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sec61a1P61620 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sec61a1P61620 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Sec61a1P61620 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Sec61a1P61620 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sec61a1P61620 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Sec61a1P61620 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sec61a1P61620 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Sec61a1P61620 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sec61a1P61620 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sec61a1P61620 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sec61a1P61620 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sec61a1P61620 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sec61a1P61620 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sec61a1P61620 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sec61a1P61620 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sec61a1P61620 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sec61a1P61620 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sec61a1P61620 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sec61a1P61620 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sec61a1P61620 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sec61a1P61620 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sec61a1P61620 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sec61a1P61620 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC14.25□□□□□ -0.13
Sec61a1P61620 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sec61a1P61620 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sec61a1P61620 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC14.25□□□□□ -0.13
Sec61a1P61620 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sec61a1P61620 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sec61a1P61620 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sec61a1P61620 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sec61a1P61620 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sec61a1P61620 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sec61a1P61620 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sec61a1P61620 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sec61a1P61620 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sec61a1P61620 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms