Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC17.6■□□□□ 0.41
Pde6bP23440 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pde6bP23440 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Pde6bP23440 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pde6bP23440 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC17.6■□□□□ 0.41
Pde6bP23440 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pde6bP23440 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pde6bP23440 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
Pde6bP23440 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pde6bP23440 AC138767.1-201ENSMUST00000222661 415 ntBASIC17.6■□□□□ 0.41
Pde6bP23440 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pde6bP23440 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Pde6bP23440 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.6■□□□□ 0.41
Pde6bP23440 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pde6bP23440 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pde6bP23440 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pde6bP23440 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pde6bP23440 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pde6bP23440 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
Pde6bP23440 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pde6bP23440 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
Pde6bP23440 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Pde6bP23440 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Pde6bP23440 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pde6bP23440 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pde6bP23440 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pde6bP23440 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pde6bP23440 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Pde6bP23440 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pde6bP23440 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pde6bP23440 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pde6bP23440 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pde6bP23440 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pde6bP23440 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pde6bP23440 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pde6bP23440 Gm44357-201ENSMUST00000195897 142 ntBASIC17.59■□□□□ 0.41
Pde6bP23440 Gm19658-201ENSMUST00000196231 138 ntBASIC17.59■□□□□ 0.41
Pde6bP23440 Gm44367-201ENSMUST00000196836 138 ntBASIC17.59■□□□□ 0.41
Pde6bP23440 Gm44350-201ENSMUST00000197197 138 ntBASIC17.59■□□□□ 0.41
Pde6bP23440 Gm44390-201ENSMUST00000197533 144 ntBASIC17.59■□□□□ 0.41
Pde6bP23440 Gm44313-201ENSMUST00000198018 138 ntBASIC17.59■□□□□ 0.41
Pde6bP23440 Gm44486-201ENSMUST00000198508 138 ntBASIC17.59■□□□□ 0.41
Pde6bP23440 Gm44314-201ENSMUST00000199263 138 ntBASIC17.59■□□□□ 0.41
Pde6bP23440 Gm44394-201ENSMUST00000199558 138 ntBASIC17.59■□□□□ 0.41
Pde6bP23440 Gm44484-201ENSMUST00000199873 138 ntBASIC17.59■□□□□ 0.41
Pde6bP23440 Gm44466-201ENSMUST00000200264 138 ntBASIC17.59■□□□□ 0.41
Pde6bP23440 Gm44359-201ENSMUST00000200671 138 ntBASIC17.59■□□□□ 0.41
Pde6bP23440 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pde6bP23440 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pde6bP23440 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pde6bP23440 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pde6bP23440 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pde6bP23440 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.58■□□□□ 0.41
Pde6bP23440 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.41
Pde6bP23440 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pde6bP23440 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pde6bP23440 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pde6bP23440 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pde6bP23440 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Pde6bP23440 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pde6bP23440 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pde6bP23440 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC17.58■□□□□ 0.4
Pde6bP23440 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC17.58■□□□□ 0.4
Pde6bP23440 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Pde6bP23440 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Pde6bP23440 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pde6bP23440 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Pde6bP23440 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pde6bP23440 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pde6bP23440 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Pde6bP23440 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pde6bP23440 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pde6bP23440 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
Pde6bP23440 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Pde6bP23440 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pde6bP23440 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Pde6bP23440 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pde6bP23440 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pde6bP23440 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pde6bP23440 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pde6bP23440 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pde6bP23440 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pde6bP23440 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC17.57■□□□□ 0.4
Pde6bP23440 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Pde6bP23440 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pde6bP23440 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Pde6bP23440 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pde6bP23440 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pde6bP23440 Mir5131-201ENSMUST00000175426 93 ntBASIC17.57■□□□□ 0.4
Pde6bP23440 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pde6bP23440 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pde6bP23440 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pde6bP23440 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Pde6bP23440 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.57■□□□□ 0.4
Pde6bP23440 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pde6bP23440 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pde6bP23440 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pde6bP23440 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Pde6bP23440 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pde6bP23440 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms