Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccl1P10146 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccl1P10146 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccl1P10146 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC12.62□□□□□ -0.39
Ccl1P10146 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccl1P10146 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl1P10146 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl1P10146 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl1P10146 Gm42901-201ENSMUST00000197735 3171 ntBASIC12.61□□□□□ -0.39
Ccl1P10146 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl1P10146 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl1P10146 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC12.61□□□□□ -0.39
Ccl1P10146 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl1P10146 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl1P10146 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl1P10146 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl1P10146 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl1P10146 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC12.61□□□□□ -0.39
Ccl1P10146 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl1P10146 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl1P10146 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl1P10146 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl1P10146 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl1P10146 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl1P10146 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl1P10146 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC12.61□□□□□ -0.39
Ccl1P10146 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl1P10146 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl1P10146 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC12.61□□□□□ -0.39
Ccl1P10146 Ntrk2-205ENSMUST00000224402 2284 ntBASIC12.6□□□□□ -0.39
Ccl1P10146 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccl1P10146 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccl1P10146 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccl1P10146 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccl1P10146 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccl1P10146 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccl1P10146 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccl1P10146 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Ccl1P10146 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC12.6□□□□□ -0.39
Ccl1P10146 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccl1P10146 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ccl1P10146 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Ccl1P10146 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Ccl1P10146 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccl1P10146 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccl1P10146 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC12.6□□□□□ -0.39
Ccl1P10146 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccl1P10146 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccl1P10146 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Ccl1P10146 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccl1P10146 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Ccl1P10146 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Ccl1P10146 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Ccl1P10146 Gm45560-201ENSMUST00000211492 1472 ntBASIC12.59□□□□□ -0.39
Ccl1P10146 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl1P10146 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl1P10146 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Ccl1P10146 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl1P10146 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl1P10146 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC12.59□□□□□ -0.39
Ccl1P10146 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl1P10146 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl1P10146 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl1P10146 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl1P10146 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl1P10146 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl1P10146 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl1P10146 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl1P10146 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl1P10146 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl1P10146 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl1P10146 App-207ENSMUST00000227737 2827 ntBASIC12.59□□□□□ -0.39
Ccl1P10146 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl1P10146 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl1P10146 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl1P10146 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
Ccl1P10146 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl1P10146 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Ccl1P10146 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl1P10146 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl1P10146 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl1P10146 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl1P10146 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl1P10146 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl1P10146 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
Ccl1P10146 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Ccl1P10146 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Ccl1P10146 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Ccl1P10146 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC12.58□□□□□ -0.4
Ccl1P10146 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccl1P10146 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Ccl1P10146 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccl1P10146 Gm42473-201ENSMUST00000201056 2291 ntBASIC12.58□□□□□ -0.4
Ccl1P10146 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ccl1P10146 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccl1P10146 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC12.58□□□□□ -0.4
Ccl1P10146 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ccl1P10146 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Ccl1P10146 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ccl1P10146 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms