Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UbbP0CG49 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UbbP0CG49 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UbbP0CG49 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
UbbP0CG49 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UbbP0CG49 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
UbbP0CG49 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UbbP0CG49 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
UbbP0CG49 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
UbbP0CG49 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
UbbP0CG49 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
UbbP0CG49 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
UbbP0CG49 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
UbbP0CG49 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
UbbP0CG49 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
UbbP0CG49 Gfra2-202ENSMUST00000227633 1480 ntBASIC14.08□□□□□ -0.16
UbbP0CG49 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UbbP0CG49 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
UbbP0CG49 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
UbbP0CG49 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.08□□□□□ -0.16
UbbP0CG49 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
UbbP0CG49 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC14.08□□□□□ -0.16
UbbP0CG49 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UbbP0CG49 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
UbbP0CG49 AC159205.3-201ENSMUST00000224614 874 ntBASIC14.08□□□□□ -0.16
UbbP0CG49 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UbbP0CG49 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UbbP0CG49 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UbbP0CG49 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
UbbP0CG49 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UbbP0CG49 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
UbbP0CG49 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
UbbP0CG49 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
UbbP0CG49 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UbbP0CG49 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
UbbP0CG49 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UbbP0CG49 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UbbP0CG49 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
UbbP0CG49 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UbbP0CG49 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
UbbP0CG49 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
UbbP0CG49 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
UbbP0CG49 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
UbbP0CG49 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
UbbP0CG49 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
UbbP0CG49 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.07□□□□□ -0.16
UbbP0CG49 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
UbbP0CG49 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UbbP0CG49 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UbbP0CG49 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UbbP0CG49 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
UbbP0CG49 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
UbbP0CG49 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
UbbP0CG49 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UbbP0CG49 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UbbP0CG49 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UbbP0CG49 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UbbP0CG49 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
UbbP0CG49 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
UbbP0CG49 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC14.07□□□□□ -0.16
UbbP0CG49 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC14.07□□□□□ -0.16
UbbP0CG49 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
UbbP0CG49 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC14.07□□□□□ -0.16
UbbP0CG49 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UbbP0CG49 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UbbP0CG49 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UbbP0CG49 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
UbbP0CG49 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UbbP0CG49 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UbbP0CG49 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UbbP0CG49 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UbbP0CG49 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
UbbP0CG49 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UbbP0CG49 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UbbP0CG49 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
UbbP0CG49 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
UbbP0CG49 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
UbbP0CG49 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
UbbP0CG49 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.06□□□□□ -0.16
UbbP0CG49 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UbbP0CG49 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UbbP0CG49 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
UbbP0CG49 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
UbbP0CG49 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UbbP0CG49 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UbbP0CG49 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UbbP0CG49 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
UbbP0CG49 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC14.06□□□□□ -0.16
UbbP0CG49 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC14.06□□□□□ -0.16
UbbP0CG49 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC14.06□□□□□ -0.16
UbbP0CG49 Gm16042-201ENSMUST00000204813 1247 ntBASIC14.06□□□□□ -0.16
UbbP0CG49 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC14.06□□□□□ -0.16
UbbP0CG49 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
UbbP0CG49 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UbbP0CG49 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UbbP0CG49 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
UbbP0CG49 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
UbbP0CG49 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UbbP0CG49 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
UbbP0CG49 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms