Protein–RNA interactions for Protein: P00375

Dhfr, Dihydrofolate reductase, mousemouse

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DhfrP00375 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
DhfrP00375 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.64□□□□□ -0.07
DhfrP00375 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
DhfrP00375 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
DhfrP00375 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
DhfrP00375 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.64□□□□□ -0.07
DhfrP00375 Mir5122-201ENSMUST00000175004 89 ntBASIC14.64□□□□□ -0.07
DhfrP00375 Gm37025-201ENSMUST00000195159 829 ntBASIC14.64□□□□□ -0.07
DhfrP00375 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC14.64□□□□□ -0.07
DhfrP00375 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
DhfrP00375 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.64□□□□□ -0.07
DhfrP00375 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
DhfrP00375 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
DhfrP00375 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
DhfrP00375 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
DhfrP00375 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.64□□□□□ -0.07
DhfrP00375 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
DhfrP00375 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
DhfrP00375 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
DhfrP00375 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
DhfrP00375 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
DhfrP00375 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
DhfrP00375 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
DhfrP00375 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
DhfrP00375 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
DhfrP00375 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
DhfrP00375 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
DhfrP00375 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
DhfrP00375 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
DhfrP00375 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
DhfrP00375 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
DhfrP00375 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC14.63□□□□□ -0.07
DhfrP00375 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
DhfrP00375 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
DhfrP00375 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC14.63□□□□□ -0.07
DhfrP00375 Arhgef4-208ENSMUST00000211073 171 ntBASIC14.63□□□□□ -0.07
DhfrP00375 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC14.63□□□□□ -0.07
DhfrP00375 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
DhfrP00375 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
DhfrP00375 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
DhfrP00375 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
DhfrP00375 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.63□□□□□ -0.07
DhfrP00375 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
DhfrP00375 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
DhfrP00375 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
DhfrP00375 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
DhfrP00375 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
DhfrP00375 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
DhfrP00375 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
DhfrP00375 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
DhfrP00375 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
DhfrP00375 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
DhfrP00375 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
DhfrP00375 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
DhfrP00375 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
DhfrP00375 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
DhfrP00375 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
DhfrP00375 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
DhfrP00375 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
DhfrP00375 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
DhfrP00375 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
DhfrP00375 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC14.62□□□□□ -0.07
DhfrP00375 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
DhfrP00375 Gm24841-201ENSMUST00000158676 357 ntBASIC14.62□□□□□ -0.07
DhfrP00375 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
DhfrP00375 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC14.62□□□□□ -0.07
DhfrP00375 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
DhfrP00375 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
DhfrP00375 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
DhfrP00375 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
DhfrP00375 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC14.62□□□□□ -0.07
DhfrP00375 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
DhfrP00375 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
DhfrP00375 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC14.62□□□□□ -0.07
DhfrP00375 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
DhfrP00375 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
DhfrP00375 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
DhfrP00375 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
DhfrP00375 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
DhfrP00375 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
DhfrP00375 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
DhfrP00375 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
DhfrP00375 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
DhfrP00375 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
DhfrP00375 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
DhfrP00375 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
DhfrP00375 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
DhfrP00375 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
DhfrP00375 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
DhfrP00375 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC14.61□□□□□ -0.07
DhfrP00375 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC14.61□□□□□ -0.07
DhfrP00375 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC14.61□□□□□ -0.07
DhfrP00375 Gm27463-201ENSMUST00000183569 57 ntBASIC14.61□□□□□ -0.07
DhfrP00375 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC14.61□□□□□ -0.07
DhfrP00375 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
DhfrP00375 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
DhfrP00375 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
DhfrP00375 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
DhfrP00375 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
DhfrP00375 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms