Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Gm45605-201ENSMUST00000210265 4269 ntBASIC13.41□□□□□ -0.26
SncaO55042 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SncaO55042 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SncaO55042 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SncaO55042 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SncaO55042 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SncaO55042 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SncaO55042 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SncaO55042 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SncaO55042 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
SncaO55042 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SncaO55042 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SncaO55042 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SncaO55042 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC13.4□□□□□ -0.26
SncaO55042 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC13.4□□□□□ -0.26
SncaO55042 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SncaO55042 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SncaO55042 Gm12669-201ENSMUST00000122162 1009 ntBASIC13.4□□□□□ -0.26
SncaO55042 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC13.4□□□□□ -0.26
SncaO55042 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SncaO55042 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SncaO55042 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
SncaO55042 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC13.4□□□□□ -0.26
SncaO55042 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC13.4□□□□□ -0.26
SncaO55042 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SncaO55042 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SncaO55042 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
SncaO55042 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SncaO55042 Gfra2-202ENSMUST00000227633 1480 ntBASIC13.4□□□□□ -0.26
SncaO55042 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SncaO55042 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.27
SncaO55042 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC13.4□□□□□ -0.27
SncaO55042 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.27
SncaO55042 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SncaO55042 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
SncaO55042 Actl10-202ENSMUST00000226583 1501 ntBASIC13.39□□□□□ -0.27
SncaO55042 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
SncaO55042 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SncaO55042 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SncaO55042 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
SncaO55042 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SncaO55042 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
SncaO55042 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
SncaO55042 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SncaO55042 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SncaO55042 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
SncaO55042 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SncaO55042 Gm715-201ENSMUST00000117865 831 ntBASIC13.39□□□□□ -0.27
SncaO55042 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SncaO55042 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
SncaO55042 Arhgef4-208ENSMUST00000211073 171 ntBASIC13.39□□□□□ -0.27
SncaO55042 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SncaO55042 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SncaO55042 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
SncaO55042 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SncaO55042 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
SncaO55042 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SncaO55042 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SncaO55042 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SncaO55042 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SncaO55042 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SncaO55042 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SncaO55042 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.38□□□□□ -0.27
SncaO55042 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SncaO55042 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SncaO55042 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SncaO55042 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
SncaO55042 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SncaO55042 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
SncaO55042 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SncaO55042 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC13.38□□□□□ -0.27
SncaO55042 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC13.38□□□□□ -0.27
SncaO55042 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC13.38□□□□□ -0.27
SncaO55042 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
SncaO55042 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC13.38□□□□□ -0.27
SncaO55042 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC13.38□□□□□ -0.27
SncaO55042 Gm3375-201ENSMUST00000203929 796 ntBASIC13.38□□□□□ -0.27
SncaO55042 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SncaO55042 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SncaO55042 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SncaO55042 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
SncaO55042 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SncaO55042 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SncaO55042 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SncaO55042 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
SncaO55042 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SncaO55042 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SncaO55042 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SncaO55042 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SncaO55042 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SncaO55042 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SncaO55042 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SncaO55042 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SncaO55042 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SncaO55042 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
SncaO55042 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SncaO55042 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SncaO55042 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.37□□□□□ -0.27
SncaO55042 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SncaO55042 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms