Protein–RNA interactions for Protein: O35900

Lsm2, U6 snRNA-associated Sm-like protein LSm2, mousemouse

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm2O35900 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lsm2O35900 Nrn1-203ENSMUST00000223611 1443 ntBASIC14.43□□□□□ -0.1
Lsm2O35900 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.43□□□□□ -0.1
Lsm2O35900 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lsm2O35900 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Lsm2O35900 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Lsm2O35900 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Lsm2O35900 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lsm2O35900 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Lsm2O35900 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Lsm2O35900 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lsm2O35900 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lsm2O35900 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Lsm2O35900 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Lsm2O35900 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC14.43□□□□□ -0.1
Lsm2O35900 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lsm2O35900 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lsm2O35900 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.43□□□□□ -0.1
Lsm2O35900 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Lsm2O35900 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lsm2O35900 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Lsm2O35900 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lsm2O35900 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lsm2O35900 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lsm2O35900 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.43□□□□□ -0.1
Lsm2O35900 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC14.43□□□□□ -0.1
Lsm2O35900 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Lsm2O35900 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.42□□□□□ -0.1
Lsm2O35900 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lsm2O35900 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lsm2O35900 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lsm2O35900 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lsm2O35900 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lsm2O35900 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lsm2O35900 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lsm2O35900 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Lsm2O35900 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lsm2O35900 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Lsm2O35900 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Lsm2O35900 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lsm2O35900 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.42□□□□□ -0.1
Lsm2O35900 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Lsm2O35900 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Lsm2O35900 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lsm2O35900 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lsm2O35900 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lsm2O35900 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC14.42□□□□□ -0.1
Lsm2O35900 Gm7791-201ENSMUST00000219066 539 ntBASIC14.42□□□□□ -0.1
Lsm2O35900 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lsm2O35900 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lsm2O35900 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lsm2O35900 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lsm2O35900 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lsm2O35900 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lsm2O35900 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Lsm2O35900 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Lsm2O35900 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Lsm2O35900 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lsm2O35900 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lsm2O35900 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Lsm2O35900 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lsm2O35900 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lsm2O35900 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.41□□□□□ -0.1
Lsm2O35900 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Lsm2O35900 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.41□□□□□ -0.1
Lsm2O35900 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lsm2O35900 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Lsm2O35900 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lsm2O35900 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Lsm2O35900 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Lsm2O35900 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC14.41□□□□□ -0.1
Lsm2O35900 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC14.41□□□□□ -0.1
Lsm2O35900 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC14.41□□□□□ -0.1
Lsm2O35900 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lsm2O35900 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lsm2O35900 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Lsm2O35900 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Lsm2O35900 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lsm2O35900 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Lsm2O35900 Zfp264-201ENSMUST00000208656 1563 ntBASIC14.41□□□□□ -0.1
Lsm2O35900 Phf7-203ENSMUST00000226565 1971 ntBASIC14.41□□□□□ -0.1
Lsm2O35900 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Lsm2O35900 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lsm2O35900 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Lsm2O35900 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lsm2O35900 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lsm2O35900 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.41□□□□□ -0.1
Lsm2O35900 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC14.41□□□□□ -0.1
Lsm2O35900 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lsm2O35900 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lsm2O35900 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lsm2O35900 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Lsm2O35900 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lsm2O35900 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lsm2O35900 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Lsm2O35900 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lsm2O35900 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lsm2O35900 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Lsm2O35900 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14.4□□□□□ -0.1
Lsm2O35900 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms